RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 OTOP3Q7RTS5 596 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 C14orf80Q86SX3 495 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 UNC93AQ86WB7 457 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 ABHD8Q96I13 439 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 LRGUKQ96M69 825 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 NPAS2Q99743 824 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 MLPHQ9BV36 600 aaPredicted RBP19.65■□□□□ 0.74
CAPN1-226ENST00000533820 PIN4Q9Y237 131 aaKnown RBP19.65■□□□□ 0.74
CAPN1-226ENST00000533820 COMMD3-BMI1R4GMX3 469 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 DDNO94850 711 aaPredicted RBP19.65■□□□□ 0.74
CAPN1-226ENST00000533820 MYL4P12829 197 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 TKTL1P51854 596 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 ADARP55265 1226 aaKnown RBP19.65■□□□□ 0.74
CAPN1-226ENST00000533820 MAP7Q14244 749 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 SEL1L3Q68CR1 1132 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 SLC27A1Q6PCB7 646 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 RPS27LQ71UM5 84 aaKnown RBP19.65■□□□□ 0.74
CAPN1-226ENST00000533820 KYQ8NBH2 561 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 B3GALNT2Q8NCR0 500 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 BHLHE22Q8NFJ8 381 aaPredicted RBP19.65■□□□□ 0.74
CAPN1-226ENST00000533820 RTKNQ9BST9 563 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 UBAP1Q9NZ09 502 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 A0A0G2JLL6 359 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-226ENST00000533820 SMIM28A0A1B0GU29 152 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 ZNF487B1APH4 448 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 TFEBP19484 476 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 CD68P34810 354 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-226ENST00000533820 HPCAP84074 193 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 KYAT1Q16773 422 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 TAPT1Q6NXT6 567 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 PRRT2Q7Z6L0 340 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-226ENST00000533820 SLC41A1Q8IVJ1 513 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 SPATA22Q8NHS9 363 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 FAM96AQ9H5X1 160 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 EIF2B3Q9NR50 452 aaKnown RBP19.64■□□□□ 0.73
CAPN1-226ENST00000533820 SLC4A7Q9Y6M7 1214 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 HUS1O60921 280 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 POU5F1BQ06416 359 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 C6orf52Q5T4I8 152 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 ZNF280DQ6N043 979 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 IFNLR1Q8IU57 520 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-226ENST00000533820 DENND6AQ8IWF6 608 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 SREK1Q8WXA9 508 aaKnown RBP19.64■□□□□ 0.73
CAPN1-226ENST00000533820 PHF12Q96QT6 1004 aa19.64■□□□□ 0.73
CAPN1-226ENST00000533820 DDX18Q9NVP1 670 aaKnown RBP19.64■□□□□ 0.73
CAPN1-226ENST00000533820 YJEFN3A6XGL0 299 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 AP2A1O95782 977 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 NELFEP18615 380 aaKnown RBP19.63■□□□□ 0.73
CAPN1-226ENST00000533820 CEACAM7Q14002 265 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 CYLC2Q14093 348 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-226ENST00000533820 POU6F1Q14863 301 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 TMEM53Q6P2H8 277 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 BNC2Q6ZN30 1099 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-226ENST00000533820 NAT14Q8WUY8 206 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 NCSTNQ92542 709 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 HAPLN3Q96S86 360 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 ULBP1Q9BZM6 244 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 ATXN3LQ9H3M9 355 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 DDIT4Q9NX09 232 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 ZDHHC7Q9NXF8 308 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 TOMM70O94826 608 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 MT-CO1P00395 513 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 THRAP10827 490 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 NCAM1P13591 858 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 DPP6P42658 865 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 ACADSBP45954 432 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 CLCN2P51788 898 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 ART3Q13508 389 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 ZBTB6Q15916 424 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 RNF135Q8IUD6 432 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 FTHL17Q9BXU8 183 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 IGSF9Q9P2J2 1179 aa19.63■□□□□ 0.73
CAPN1-226ENST00000533820 TMEM247A6NEH6 219 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 NEMP2A6NFY4 417 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 HDAC3O15379 428 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 GLDCP23378 1020 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 ADRA1BP35368 520 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 RPL14P50914 215 aaKnown RBP19.62■□□□□ 0.73
CAPN1-226ENST00000533820 WSCD1Q658N2 575 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 UGT2A3Q6UWM9 527 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 TMEM135Q86UB9 458 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 NT5DC4Q86YG4 428 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 CRYBG2Q8N1P7 616 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 PCDH20Q8N6Y1 951 aaKnown RBP19.62■□□□□ 0.73
CAPN1-226ENST00000533820 LRRC52Q8N7C0 313 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 WNT8BQ93098 351 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 GRIP2Q9C0E4 1043 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 SEMA6AQ9H2E6 1030 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 OXSMQ9NWU1 459 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 MATN2O00339 956 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 FBXO21O94952 628 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 USP17L7P0C7H9 530 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 SRGAP2BP0DMP2 458 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 NOS2P35228 1153 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 MPP1Q00013 466 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 DPYSQ14117 519 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 HSFY1Q96LI6 401 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 TSNARE1Q96NA8 513 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 NPY6RQ99463 290 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 ADA2Q9NZK5 511 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms