RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 GREM1O60565 184 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 LMAN1P49257 510 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 RENBPP51606 427 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 ITGA8P53708 1063 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 CDK16Q00536 496 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 SLC10A2Q12908 348 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 PRPSAP1Q14558 356 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 POLD3Q15054 466 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 PDGFRLQ15198 375 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 MPP7Q5T2T1 576 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 CFAP58Q5T655 872 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 TMCO4Q5TGY1 634 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 TFAP2DQ7Z6R9 452 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 NLRP14Q86W24 1093 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 CPXM2Q8N436 756 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 NPWQ8N729 165 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 FBXO25Q8TCJ0 367 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 EXOC4Q96A65 974 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 P2RY11Q96G91 374 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 RUFY1Q96T51 708 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 LGMNQ99538 433 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 MAGEB5Q9BZ81 275 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 PLA2G2FQ9BZM2 168 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 MAGEH1Q9H213 219 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 BRD9Q9H8M2 597 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 VIPAS39Q9H9C1 493 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 USP29Q9HBJ7 922 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 DUS2Q9NX74 493 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 MPP6Q9NZW5 540 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 SEPT10Q9P0V9 454 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 KLHL8Q9P2G9 620 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 SNX10Q9Y5X0 201 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 MYO10Q9HD67 2058 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 MAP3K6O95382 1288 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 ASGR2P07307 311 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 GDI1P31150 447 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 RPL22P35268 128 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 IFNAR2P48551 515 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 GDF10P55107 478 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 TDGQ13569 410 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 CDH18Q13634 790 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 GRM2Q14416 872 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 MPPE1Q53F39 396 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 FAM133BQ5BKY9 247 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 NADSYN1Q6IA69 706 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 CENPUQ71F23 418 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 C14orf80Q86SX3 495 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 BBS7Q8IWZ6 715 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 ZNF683Q8IZ20 524 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 ADGRG2Q8IZP9 1017 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 GJD3Q8N144 294 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 PDIK1LQ8N165 341 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 MREGQ8N565 214 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 ZCCHC9Q8N567 271 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 GOLGA6L1Q8N7Z2 621 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 RIN3Q8TB24 985 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 ATP2A3Q93084 1043 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 TMA16Q96EY4 203 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 HINFPQ9BQA5 517 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 FAM83CQ9BQN1 747 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 SP110Q9HB58 689 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 RAB6BQ9NRW1 208 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 ZDHHC18Q9NUE0 388 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 GRHL1Q9NZI5 618 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 ILVBLA1L0T0 632 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 SCAMP3O14828 347 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 MATN3O15232 486 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 NFATC1O95644 943 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 RHOCP08134 193 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 IVDP26440 423 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 ARL4CP56559 192 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 GEMIN4P57678 1058 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 PFKPQ01813 784 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 NR1H3Q13133 447 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 HNRNPDQ14103 355 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 HIF1AQ16665 826 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 PARP6Q2NL67 630 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 ANKRD20A2Q5SQ80 823 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 RNASEH2BQ5TBB1 312 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 ANKRD20A1Q5TYW2 823 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 ANKRD20A3Q5VUR7 823 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 AFMIDQ63HM1 303 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 HIBCHQ6NVY1 386 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 FAM217AQ8IXS0 508 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 IGSF8Q969P0 613 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 WBP2Q969T9 261 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 CELF6Q96J87 481 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 TTC25Q96NG3 672 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 ZNF599Q96NL3 588 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 LINC00597Q9H2U6 94 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 EIF2B3Q9NR50 452 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 TCF20Q9UGU0 1960 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 IPO11Q9UI26 975 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 SORCS3Q9UPU3 1222 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 WNT6Q9Y6F9 365 aa11.15□□□□□ -0.62
CCDC90B-218ENST00000533761 RASA4BC9J798 803 aa11.14□□□□□ -0.63
CCDC90B-218ENST00000533761 H0Y626 953 aa11.14□□□□□ -0.63
CCDC90B-218ENST00000533761 EIF3HO15372 352 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC90B-218ENST00000533761 PSMD3O43242 534 aa11.14□□□□□ -0.63
CCDC90B-218ENST00000533761 RASA4O43374 803 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms