RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 FTH1P19P0C7X4 201 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 ZNF883P0CG24 379 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 RHOQP17081 205 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 DESP17661 470 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 CTSKP43235 329 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 SERPINH1P50454 418 aaKnown RBP10.66□□□□□ -0.7
CAPN1-225ENST00000533704 CLCN6P51797 869 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 GSCP56915 257 aaPredicted RBP10.66□□□□□ -0.7
CAPN1-225ENST00000533704 RPL7AP62424 266 aaKnown RBP10.66□□□□□ -0.7
CAPN1-225ENST00000533704 SUZ12Q15022 739 aaKnown RBP10.66□□□□□ -0.7
CAPN1-225ENST00000533704 SLC45A4Q5BKX6 768 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 ARSIQ5FYB1 569 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 SFMBT2Q5VUG0 894 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 DPY19L3Q6ZPD9 716 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 IRF2BP2Q7Z5L9 587 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 SLFN11Q7Z7L1 901 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 DNAAF5Q86Y56 855 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 MCOLN2Q8IZK6 566 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 PYROXD2Q8N2H3 581 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 CHCHD4Q8N4Q1 142 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 BAP1Q92560 729 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 CENPIQ92674 756 aaPredicted RBP10.66□□□□□ -0.7
CAPN1-225ENST00000533704 NAP1L5Q96NT1 182 aaPredicted RBP10.66□□□□□ -0.7
CAPN1-225ENST00000533704 TM6SF2Q9BZW4 377 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 OSBPL2Q9H1P3 480 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 ZDHHC6Q9H6R6 413 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 NDFIP2Q9NV92 336 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 ZNF212Q9UDV6 495 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 IL36AQ9UHA7 158 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 KLK13Q9UKR3 277 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 PCOLCE2Q9UKZ9 415 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 HPCAL4Q9UM19 191 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 BTBD3Q9Y2F9 522 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 SHROOM3Q8TF72 1996 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 PLXNB3Q9ULL4 1909 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 A0A1W2PQU0 124 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 C1QTNF9BB2RNN3 333 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 RNF103O00237 685 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 RAMP2O60895 175 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 LEFTY1O75610 366 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 ZMPSTE24O75844 475 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 PCDH8O95206 1070 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 C1QTNF9P0C862 333 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 PRLRP16471 622 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 EPHB2P29323 1055 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 ETFBP38117 255 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 MAPKAPK2P49137 400 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 CCNHP51946 323 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-225ENST00000533704 ZNF143P52747 638 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-225ENST00000533704 TPM4P67936 248 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 ARF5P84085 180 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 NRG1Q02297 640 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-225ENST00000533704 SLC20A2Q08357 652 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 POLD3Q15054 466 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-225ENST00000533704 ZNF423Q2M1K9 1284 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 SETMARQ53H47 684 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-225ENST00000533704 CARD16Q5EG05 197 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 ARTNQ5T4W7 220 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 PIP5KL1Q5T9C9 394 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 MANEALQ5VSG8 457 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 NAPEPLDQ6IQ20 393 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 UNQ6494/PRO21346Q6UXR6 183 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 TMC6Q7Z403 805 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 GATAD2AQ86YP4 633 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 PCDH20Q8N6Y1 951 aaKnown RBP10.65□□□□□ -0.7
CAPN1-225ENST00000533704 TMIEQ8NEW7 156 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 OR6K2Q8NGY2 324 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 NTAN1Q96AB6 310 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 CNPY3Q9BT09 278 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 KDM4CQ9H3R0 1056 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 HAUS4Q9H6D7 363 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 CBX8Q9HC52 389 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 GDF3Q9NR23 364 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 TMEM248Q9NWD8 314 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 GPATCH2LQ9NWQ4 482 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 MYO6Q9UM54 1294 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 APOBEC2Q9Y235 224 aaKnown RBP10.65□□□□□ -0.7
CAPN1-225ENST00000533704 CA5BQ9Y2D0 317 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 PCDHGB2Q9Y5G2 931 aa10.65□□□□□ -0.7
CAPN1-225ENST00000533704 ARID1BQ8NFD5 2236 aaPredicted RBP10.65□□□□□ -0.71
CAPN1-225ENST00000533704 AKAP13Q12802 2813 aa10.65□□□□□ -0.71
CAPN1-225ENST00000533704 LRRK1Q38SD2 2015 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 A0A1B0GTH6 734 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 A0A1W2PQC6 194 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 A0A1W2PR77 199 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 TCRBV5S1A1TA0A578 114 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 TLR4O00206 839 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 SLC31A1O15431 190 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 LATO43561 262 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 BUB1O43683 1085 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 CBFA2T3O75081 653 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 TRIM16O95361 564 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 SKILP12757 684 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 PSMA2P25787 234 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 L1CAMP32004 1257 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 GKP32189 559 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 TAS2R38P59533 333 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 OGDHQ02218 1023 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 KLHL30Q0D2K2 578 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 CCDC15Q0P6D6 951 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms