RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 FOXK1P85037 733 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 EIF2B5Q13144 721 aaKnown RBP7.99□□□□□ -1.13
NXF1-215ENST00000533440 ADAM9Q13443 819 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 EIF4EBP2Q13542 120 aaPredicted RBP7.99□□□□□ -1.13
NXF1-215ENST00000533440 MORC3Q14149 939 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 FGL2Q14314 439 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 CLCA4Q14CN2 919 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 CNGA2Q16280 664 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 ZC3H12AQ5D1E8 599 aaKnown RBP7.99□□□□□ -1.13
NXF1-215ENST00000533440 TPRG1LQ5T0D9 272 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 TTC39BQ5VTQ0 682 aaPredicted RBP7.99□□□□□ -1.13
NXF1-215ENST00000533440 SYPL2Q5VXT5 272 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 RESP18Q5W5W9 173 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 ERN2Q76MJ5 926 aaKnown RBP7.99□□□□□ -1.13
NXF1-215ENST00000533440 RAB11FIP2Q7L804 512 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 B3GNT8Q7Z7M8 397 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 TAC4Q86UU9 113 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 CIR1Q86X95 450 aaPredicted RBP7.99□□□□□ -1.13
NXF1-215ENST00000533440 CEP57L1Q8IYX8 460 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 OR52K2Q8NGK3 314 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 OR2A12Q8NGT7 310 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 LMX1AQ8TE12 382 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 HTR3CQ8WXA8 447 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 TFAP2BQ92481 460 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 GLMNQ92990 594 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 PAGE5Q96GU1 130 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 TBATAQ96M53 351 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 LENG8Q96PV6 779 aaPredicted RBP7.99□□□□□ -1.13
NXF1-215ENST00000533440 PPP1R9BQ96SB3 815 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 IL12RB2Q99665 862 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 ZSWIM1Q9BR11 485 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 FEM1AQ9BSK4 669 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 FUCA2Q9BTY2 467 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 TRPM6Q9BX84 2022 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 HDAC8Q9BY41 377 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 SLC17A9Q9BYT1 436 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 SERTAD1Q9UHV2 236 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 HS3ST2Q9Y278 367 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 MAN2B2Q9Y2E5 1009 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 COQ4Q9Y3A0 265 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 SCN8AQ9UQD0 1980 aa7.99□□□□□ -1.13
NXF1-215ENST00000533440 UTP20O75691 2785 aaKnown RBP7.98□□□□□ -1.13
NXF1-215ENST00000533440 KCNU1A8MYU2 1149 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 LMO7DNF2Z398 122 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 TMX2-CTNND1H3BSU7 103 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 GCATO75600 419 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 PAK4O96013 591 aaPredicted RBP7.98□□□□□ -1.13
NXF1-215ENST00000533440 PRNPP04156 253 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 PAEPP09466 180 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 SRCP12931 536 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 RPL13P26373 211 aaKnown RBP7.98□□□□□ -1.13
NXF1-215ENST00000533440 CCKBRP32239 447 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 PFN3P60673 137 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 YWHAEP62258 255 aaKnown RBP7.98□□□□□ -1.13
NXF1-215ENST00000533440 RPS21P63220 83 aaKnown RBP7.98□□□□□ -1.13
NXF1-215ENST00000533440 PDE1CQ14123 709 aaPredicted RBP7.98□□□□□ -1.13
NXF1-215ENST00000533440 STILQ15468 1287 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 CBWD6Q4V339 395 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 ZCWPW2Q504Y3 356 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 C4orf17Q53FE4 359 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 CBWD3Q5JTY5 395 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 RABGAP1LQ5R372 815 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 CBWD5Q5RIA9 395 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 MANEAQ5SRI9 462 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 KIAA1161Q6NSJ0 714 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 DTX1Q86Y01 620 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 JAMLQ86YT9 394 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 ATP6V0D2Q8N8Y2 350 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 ZNF564Q8TBZ8 553 aaPredicted RBP7.98□□□□□ -1.13
NXF1-215ENST00000533440 BTN2A2Q8WVV5 523 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 ZNF396Q96N95 335 aaPredicted RBP7.98□□□□□ -1.13
NXF1-215ENST00000533440 KLF6Q99612 283 aaPredicted RBP7.98□□□□□ -1.13
NXF1-215ENST00000533440 MIS12Q9H081 205 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 EPN3Q9H201 632 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 ADNPQ9H2P0 1102 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 DYRK4Q9NR20 520 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 WDR70Q9NW82 654 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.98□□□□□ -1.13
NXF1-215ENST00000533440 FAM13BQ9NYF5 915 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 SEPT10Q9P0V9 454 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 SPASTQ9UBP0 616 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 PCDHA7Q9UN72 937 aa7.98□□□□□ -1.13
NXF1-215ENST00000533440 TEP1Q99973 2627 aaKnown RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 D6RAR5 112 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 M0QYV0 167 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 RNF225M0QZC1 329 aaPredicted RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 FPGTO14772 594 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 SART1O43290 800 aaKnown RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 AP1G1O43747 822 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 BNIP3LO60238 219 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 STX10O60499 249 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 RHOBTB3O94955 611 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 TRUB2O95900 331 aaKnown RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 MT-CO1P00395 513 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 MYL1P05976 194 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 HGFP14210 728 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 CASRP41180 1078 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 ADKP55263 362 aaKnown RBP7.97□□□□□ -1.13
NXF1-215ENST00000533440 CYP4F2P78329 520 aa7.97□□□□□ -1.13
NXF1-215ENST00000533440 IGFBP7Q16270 282 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms