RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.3■□□□□ 0.84
HIPK3-205ENST00000531504 IPO11Q9UI26 975 aaKnown RBP20.3■□□□□ 0.84
HIPK3-205ENST00000531504 TRPM6Q9BX84 2022 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 AHCTF1Q8WYP5 2266 aa20.3■□□□□ 0.84
HIPK3-205ENST00000531504 RP1P56715 2156 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 SPTY2D1-AS1A0A0U1RR47 76 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 PMS2P1A4D2B8 440 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 TPP1O14773 563 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 SUV39H1O43463 412 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 PRNPP04156 253 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 SLC2A3P11169 496 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 CHRNA3P32297 505 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 RABIFP47224 123 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 EIF3IQ13347 325 aaKnown RBP20.29■□□□□ 0.84
HIPK3-205ENST00000531504 SPIDRQ14159 915 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 DEFB133Q30KQ1 61 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 SYPL2Q5VXT5 272 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 CRTC1Q6UUV9 634 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 PPP1R16AQ96I34 528 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 TIGD1Q96MW7 591 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 PRMT1Q99873 361 aaKnown RBP20.29■□□□□ 0.84
HIPK3-205ENST00000531504 SEPT3Q9UH03 358 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 ZFR2Q9UPR6 939 aaKnown RBP20.29■□□□□ 0.84
HIPK3-205ENST00000531504 PCDHB4Q9Y5E5 795 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 PCDHGA7Q9Y5G6 932 aa20.29■□□□□ 0.84
HIPK3-205ENST00000531504 MUSKO15146 869 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 TRUB2O95900 331 aaKnown RBP20.28■□□□□ 0.84
HIPK3-205ENST00000531504 AFPP02771 609 aaKnown RBP20.28■□□□□ 0.84
HIPK3-205ENST00000531504 CTSLP07711 333 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 BRD2P25440 801 aaKnown RBP20.28■□□□□ 0.84
HIPK3-205ENST00000531504 ACADSBP45954 432 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 RPS21P63220 83 aaKnown RBP20.28■□□□□ 0.84
HIPK3-205ENST00000531504 NFKB2Q00653 900 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 LRMPQ12912 555 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 TMEM259Q4ZIN3 620 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 SEL1L3Q68CR1 1132 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 KIAA1161Q6NSJ0 714 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 ERN2Q76MJ5 926 aaKnown RBP20.28■□□□□ 0.84
HIPK3-205ENST00000531504 LMX1AQ8TE12 382 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 BTN2A2Q8WVV5 523 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 EXTL1Q92935 676 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 ALG14Q96F25 216 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 LIN37Q96GY3 246 aaPredicted RBP20.28■□□□□ 0.84
HIPK3-205ENST00000531504 BMFQ96LC9 184 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 RPRD1AQ96P16 312 aaPredicted RBP20.28■□□□□ 0.84
HIPK3-205ENST00000531504 HDAC8Q9BY41 377 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 SYNDIG1Q9H7V2 258 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 HS3ST2Q9Y278 367 aa20.28■□□□□ 0.84
HIPK3-205ENST00000531504 PLD2O14939 933 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 IGLV3-25P01717 112 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 JUNDP17535 347 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 KRT83P78385 493 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 MTA1Q13330 715 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 MAPK8IP2Q13387 824 aaPredicted RBP20.27■□□□□ 0.84
HIPK3-205ENST00000531504 PERM1Q5SV97 790 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 KRBA2Q6ZNG9 492 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 C14orf80Q86SX3 495 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 ATP11CQ8NB49 1132 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 SEMA3CQ99985 751 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 ZSWIM1Q9BR11 485 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 SLC17A9Q9BYT1 436 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 MUC3BQ9H195 1237 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 POPDC2Q9HBU9 364 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 SPASTQ9UBP0 616 aa20.27■□□□□ 0.84
HIPK3-205ENST00000531504 POM121BA6NF01 834 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 SLC16A3O15427 465 aaKnown RBP20.26■□□□□ 0.83
HIPK3-205ENST00000531504 EFSO43281 561 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 PRR29P0C7W0 189 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 SRCP12931 536 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 SLC5A2P31639 672 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 CCR1P32246 355 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 RPL34P49207 117 aaKnown RBP20.26■□□□□ 0.83
HIPK3-205ENST00000531504 PDX1P52945 283 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 CENPCQ03188 943 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 FBXL22Q6P050 247 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 ZSCAN30Q86W11 494 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 JAMLQ86YT9 394 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 OR2A12Q8NGT7 310 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 CCDC34Q96HJ3 373 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 NT5C1BQ96P26 610 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 C2orf49Q9BVC5 232 aaPredicted RBP20.26■□□□□ 0.83
HIPK3-205ENST00000531504 BOCQ9BWV1 1114 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 STRADBQ9C0K7 418 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 FAM204AQ9H8W3 233 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 ANKMY1Q9P2S6 941 aa20.26■□□□□ 0.83
HIPK3-205ENST00000531504 FLNCQ14315 2725 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 TMX2-CTNND1H3BSU7 103 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 FPGTO14772 594 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 PPFIA2O75334 1257 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 CLDN11O75508 207 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 FAM87AP0C7U9 286 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 ITGB6P18564 788 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 RECQLP46063 649 aaPredicted RBP20.25■□□□□ 0.83
HIPK3-205ENST00000531504 NEK3P51956 506 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 YWHAZP63104 245 aaKnown RBP20.25■□□□□ 0.83
HIPK3-205ENST00000531504 PDE1CQ14123 709 aaPredicted RBP20.25■□□□□ 0.83
HIPK3-205ENST00000531504 FBXO39Q8N4B4 442 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 GRIN3AQ8TCU5 1115 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 FEM1CQ96JP0 617 aa20.25■□□□□ 0.83
HIPK3-205ENST00000531504 MED15Q96RN5 788 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms