RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 HNRNPA2B1P22626 353 aaKnown RBP18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 AKT2P31751 481 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 MTIF2P46199 727 aaKnown RBP18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 SNX16P57768 344 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 DEUP1Q05D60 604 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 NEK5Q6P3R8 708 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 C22orf39Q6P5X5 142 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 GCNT7Q6ZNI0 430 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 DCAF4L2Q8NA75 395 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 OR4C6Q8NH72 309 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 SNIP1Q8TAD8 396 aaKnown RBP18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 IL36AQ9UHA7 158 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 PCDHB1Q9Y5F3 818 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 LRRK1Q38SD2 2015 aa18.84■□□□□ 0.61
SSSCA1-206ENST00000531405 DRGXA6NNA5 263 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 LEFTY1O75610 366 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 PIAS2O75928 621 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 MT-CO3P00414 261 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 PRNPP04156 253 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 GIMD1P0DJR0 217 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 OR1E1P30953 314 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 CCDC173Q0VFZ6 552 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 C2CD6Q53TS8 623 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 ZNF542PQ5EBM4 170 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 ARTNQ5T4W7 220 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 DPY19L3Q6ZPD9 716 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 ERN2Q76MJ5 926 aaKnown RBP18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 SETD3Q86TU7 594 aaPredicted RBP18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 BAP1Q92560 729 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 FGF11Q92914 225 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 NT5C3BQ969T7 300 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 FCRL3Q96P31 734 aaPredicted RBP18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 RRN3Q9NYV6 651 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 KIAA1468Q9P260 1216 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 STAP1Q9ULZ2 295 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 TENM4Q6N022 2769 aa18.83■□□□□ 0.6
SSSCA1-206ENST00000531405 SRGAP2O75044 1071 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 ZNF821O75541 412 aaPredicted RBP18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 E2F1Q01094 437 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 TMEM259Q4ZIN3 620 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 HS1BP3Q53T59 392 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 FAM102AQ5T9C2 384 aaPredicted RBP18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 TRNP1Q6NT89 227 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 LRRC31Q6UY01 552 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 PTAR1Q7Z6K3 402 aaPredicted RBP18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 ERICH1Q86X53 443 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 ZDHHC17Q8IUH5 632 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 FAM71AQ8IYT1 594 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 CACTIN-AS1Q8N1I8 211 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 PGAP3Q96FM1 320 aaPredicted RBP18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 SPON2Q9BUD6 331 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 HDAC8Q9BY41 377 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 PDCL3Q9H2J4 239 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 ACTL7AQ9Y615 435 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 WASF2Q9Y6W5 498 aa18.82■□□□□ 0.6
SSSCA1-206ENST00000531405 IGLV3-10A0A075B6K4 115 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 C1QL1O75973 258 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 NEBLO76041 1014 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 ACTN2P35609 894 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 FLT3P36888 993 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 RECQLP46063 649 aaPredicted RBP18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 CLCN6P51797 869 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 CCDC15Q0P6D6 951 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 FGL2Q14314 439 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 TBC1D25Q3MII6 688 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 SLC25A52Q3SY17 297 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 TAF3Q5VWG9 929 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 DPY19L2P1Q6NXN4 242 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 Q6ZSR6 202 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 ABI3BPQ7Z7G0 1075 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 XYLT1Q86Y38 959 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 TMEM35BQ8NCS4 154 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 SLC39A7Q92504 469 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 APOLD1Q96LR9 279 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 DNAJC28Q9NX36 388 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 ZNF212Q9UDV6 495 aa18.81■□□□□ 0.6
SSSCA1-206ENST00000531405 LY6G6EA0A0G2JKS1 128 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 POM121BA6NF01 834 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 GOLGA8SH3BPF8 625 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 RAD51BO15315 384 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 ZMPSTE24O75844 475 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 ZIC2O95409 532 aaPredicted RBP18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 F9P00740 461 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 CKMT1AP12532 417 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 CDH5P33151 784 aaPredicted RBP18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 GABRB2P47870 512 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 DNA2P51530 1060 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 NEK3P51956 506 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 RAPGEF1Q13905 1077 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 MAN2A1Q16706 1144 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 HSP90AA4PQ58FG1 418 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 C18orf8Q96DM3 657 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 PPP1R16AQ96I34 528 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 BMFQ96LC9 184 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 C1orf74Q96LT6 269 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 CFAP57Q96MR6 1250 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 ATP13A1Q9HD20 1204 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 NLGN3Q9NZ94 848 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 PAXBP1Q9Y5B6 917 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms