RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 OR12D3Q9UGF7 316 aa22.76■■□□□ 1.23
TRAPPC4-210ENST00000531290 PCDHGA1Q9Y5H4 931 aa22.76■■□□□ 1.23
TRAPPC4-210ENST00000531290 KNL1Q8NG31 2342 aa22.76■■□□□ 1.23
TRAPPC4-210ENST00000531290 PCDH8O95206 1070 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 CDK4P11802 303 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 ETFBP38117 255 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 COPB1P53618 953 aaKnown RBP22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 SYCP1Q15431 976 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 SMAD1Q15797 465 aaKnown RBP22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 C15orf59Q2T9L4 293 aaPredicted RBP22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 CCDC14Q49A88 953 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 RWDD4Q6NW29 188 aaKnown RBP22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 DPY19L3Q6ZPD9 716 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 ERN2Q76MJ5 926 aaKnown RBP22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 HORMAD1Q86X24 394 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 NEK11Q8NG66 645 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 KLK6Q92876 244 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 HDAC8Q9BY41 377 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 ZNF212Q9UDV6 495 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 CHD6Q8TD26 2715 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 ZZEF1O43149 2961 aa22.75■■□□□ 1.23
TRAPPC4-210ENST00000531290 FAM149AA5PLN7 773 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 C2CD4BA6NLJ0 364 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 EPHB6O15197 1021 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 LEFTY1O75610 366 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 ZMPSTE24O75844 475 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 C1SP09871 688 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 KRT3P12035 628 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 PRLRP16471 622 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 CDK11BP21127 795 aaKnown RBP22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 AKT2P31751 481 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 NSFP46459 744 aaKnown RBP22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 SERPINH1P50454 418 aaKnown RBP22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 ARTNQ5T4W7 220 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 CCDC183Q5T5S1 534 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 RBM43Q6ZSC3 357 aaKnown RBP22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 MARCH9Q86YJ5 346 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 PCDH20Q8N6Y1 951 aaKnown RBP22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 MDM1Q8TC05 714 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 OSBPL2Q9H1P3 480 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 RETREG1Q9H6L5 497 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 ADAM22Q9P0K1 906 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 CA5BQ9Y2D0 317 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 SIK3Q9Y2K2 1263 aa22.74■■□□□ 1.23
TRAPPC4-210ENST00000531290 TRABD2BA6NFA1 517 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 RHOQP17081 205 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 NRG1Q02297 640 aaPredicted RBP22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 DNAJC3Q13217 504 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 ZNF284Q2VY69 593 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 CARD16Q5EG05 197 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 STRADAQ7RTN6 431 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 TMPRSS12Q86WS5 348 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 JOSD2Q8TAC2 188 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 MYOCQ99972 504 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 HEPHQ9BQS7 1158 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 LIMA1Q9UHB6 759 aaKnown RBP22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 WDFY3Q8IZQ1 3526 aa22.73■■□□□ 1.23
TRAPPC4-210ENST00000531290 ZNF821O75541 412 aaPredicted RBP22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 RFPL3O75679 317 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 THEGLP0DJG4 465 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 UNGP13051 313 aaPredicted RBP22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 PTPN9P43378 593 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 NEK3P51956 506 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 ARF5P84085 180 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 MYL5Q02045 173 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 UBXN1Q04323 297 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 RAB6CQ53S08 254 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 FBXL19Q6PCT2 694 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 PDCD7Q8N8D1 485 aaKnown RBP22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 TMEM145Q8NBT3 493 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 PCDHB18PQ96TA0 734 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 SELENOOQ9BVL4 669 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 RAB6CQ9H0N0 254 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 SEPT11Q9NVA2 429 aaKnown RBP22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 HPCAL4Q9UM19 191 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 LHX6Q9UPM6 363 aa22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 FCF1Q9Y324 198 aaKnown RBP22.72■■□□□ 1.23
TRAPPC4-210ENST00000531290 LGALS16A8MUM7 142 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 RNF103O00237 685 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 GJB6O95452 261 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 CALB1P05937 261 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 PLEKP08567 350 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 JUPP14923 745 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 HNRNPA2B1P22626 353 aaKnown RBP22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 ACVRL1P37023 503 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 MAPKAPK2P49137 400 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 GEMIN4P57678 1058 aaKnown RBP22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 STX1AQ16623 288 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 CLEC16AQ2KHT3 1053 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 SFMBT2Q5VUG0 894 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 RYBPQ8N488 228 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 FAM172AQ8WUF8 416 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 CENPIQ92674 756 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 KLHL11Q9NVR0 708 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 HECAQ9UBI9 543 aaPredicted RBP22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 DNAI1Q9UI46 699 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 WASF2Q9Y6W5 498 aa22.71■■□□□ 1.23
TRAPPC4-210ENST00000531290 CABIN1Q9Y6J0 2220 aa22.7■■□□□ 1.23
TRAPPC4-210ENST00000531290 FREM2Q5SZK8 3169 aa22.7■■□□□ 1.22
TRAPPC4-210ENST00000531290 CXorf51AA0A1B0GTR3 108 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms