RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 KLHDC7BQ96G42 594 aa9.44□□□□□ -0.9
CHMP4A-205ENST00000531158 APOLD1Q96LR9 279 aa9.44□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF830Q96NB3 372 aaPredicted RBP9.44□□□□□ -0.9
CHMP4A-205ENST00000531158 PSMB7Q99436 277 aa9.44□□□□□ -0.9
CHMP4A-205ENST00000531158 LGMNQ99538 433 aa9.44□□□□□ -0.9
CHMP4A-205ENST00000531158 ST7Q9NRC1 585 aa9.44□□□□□ -0.9
CHMP4A-205ENST00000531158 HOOK1Q9UJC3 728 aaKnown RBP9.44□□□□□ -0.9
CHMP4A-205ENST00000531158 ZFR2Q9UPR6 939 aaKnown RBP9.44□□□□□ -0.9
CHMP4A-205ENST00000531158 UNC13CQ8NB66 2214 aa9.44□□□□□ -0.9
CHMP4A-205ENST00000531158 DOPEY2Q9Y3R5 2298 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 A0A1W2PQU0 124 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 F5H5T6 163 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 ALOX15BO15296 676 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 SLC31A1O15431 190 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 LZTS3O60299 673 aaPredicted RBP9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 SNAP91O60641 907 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 USP12O75317 370 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 CSO75390 466 aaKnown RBP9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 CNTN5O94779 1100 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 SRCP12931 536 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 BMP6P22004 513 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 PCBP4P57723 403 aaKnown RBP9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 YWHAZP63104 245 aaKnown RBP9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 GABREP78334 506 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 SKOR1P84550 965 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 DAB2P98082 770 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 LRRC63Q05C16 580 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 PDCLQ13371 301 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 FGL2Q14314 439 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 STAT4Q14765 748 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 STILQ15468 1287 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 DPCR1Q3MIW9 517 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 TMEM259Q4ZIN3 620 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 C4orf17Q53FE4 359 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF542PQ5EBM4 170 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 ARHGAP40Q5TG30 622 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 SEL1L3Q68CR1 1132 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 CHST14Q8NCH0 376 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 OR2A12Q8NGT7 310 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 STK32AQ8WU08 396 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 PRR11Q96HE9 360 aaPredicted RBP9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF578Q96N58 590 aaPredicted RBP9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 SLC2A13Q96QE2 648 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 POPDC2Q9HBU9 364 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 METTL14Q9HCE5 456 aaKnown RBP9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 PREBQ9HCU5 417 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 KLHL11Q9NVR0 708 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 KLF15Q9UIH9 416 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 HS3ST2Q9Y278 367 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 TBC1D30Q9Y2I9 924 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 LRRK2Q5S007 2527 aa9.43□□□□□ -0.9
CHMP4A-205ENST00000531158 SYNJ2BP-COX16A0A087WUM0 186 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 POM121BA6NF01 834 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 RAD51BO15315 384 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 BNIP3LO60238 219 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF821O75541 412 aaPredicted RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 GRAP2O75791 330 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 TFE3P19532 575 aaPredicted RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 TGM2P21980 687 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 NUDT1P36639 197 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 CCR10P46092 362 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 LSSP48449 732 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 PDX1P52945 283 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 TMPRSS3P57727 454 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 E2F1Q01094 437 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 APBA1Q02410 837 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 SULT2A1Q06520 285 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 AUHQ13825 339 aaKnown RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 DRAP1Q14919 205 aaPredicted RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 C5orf22Q49AR2 442 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 ACCSLQ4AC99 568 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 ALFQ53S48 1182 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 ISM2Q6H9L7 571 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 OR6B2Q6IFH4 312 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 TTI2Q6NXR4 508 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 GJB7Q6PEY0 223 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 ABI3BPQ7Z7G0 1075 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 HORMAD1Q86X24 394 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 CCDC117Q8IWD4 279 aaPredicted RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF683Q8IZ20 524 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 DEFB106AQ8N104 65 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF606Q8WXB4 792 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 MED8Q96G25 268 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 BMFQ96LC9 184 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 RPRD1AQ96P16 312 aaPredicted RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 GSDMAQ96QA5 445 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 CPXM1Q96SM3 734 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 TSG101Q99816 390 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 CALN1Q9BXU9 219 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 PDCL3Q9H2J4 239 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 THAP9Q9H5L6 903 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 FAM204AQ9H8W3 233 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 NLGN3Q9NZ94 848 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 COX16Q9P0S2 106 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 VANGL2Q9ULK5 521 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 PNMA8BQ9ULN7 279 aaPredicted RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 PAXBP1Q9Y5B6 917 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms