RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 RAB6CQ9H0N0 254 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 TNKS2Q9H2K2 1166 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 DYRK4Q9NR20 520 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 PPARGC1AQ9UBK2 798 aaKnown RBP16.13■□□□□ 0.17
CPSF1-205ENST00000531042 IL36AQ9UHA7 158 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 CA5BQ9Y2D0 317 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 GPSM3Q9Y4H4 160 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 ADAMTS20P59510 1910 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 A0A1W2PQU0 124 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 C1SP09871 688 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 SOX5P35711 763 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 RECQLP46063 649 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-205ENST00000531042 SERPINH1P50454 418 aaKnown RBP16.12■□□□□ 0.17
CPSF1-205ENST00000531042 JAM2P57087 298 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 POLR2FP61218 127 aaKnown RBP16.12■□□□□ 0.17
CPSF1-205ENST00000531042 ARF5P84085 180 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 GNA12Q03113 381 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 SLC20A2Q08357 652 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 ZNF284Q2VY69 593 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 CCDC14Q49A88 953 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 DPY19L3Q6ZPD9 716 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 ERN2Q76MJ5 926 aaKnown RBP16.12■□□□□ 0.17
CPSF1-205ENST00000531042 TMPRSS12Q86WS5 348 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 HORMAD1Q86X24 394 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 GRIN3AQ8TCU5 1115 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 RXFP2Q8WXD0 754 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 TSC1Q92574 1164 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 KLK6Q92876 244 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 KLHDC7BQ96G42 594 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 CEP44Q9C0F1 390 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 ATP13A1Q9HD20 1204 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 NLRC4Q9NPP4 1024 aa16.12■□□□□ 0.17
CPSF1-205ENST00000531042 FAM207AQ9NSI2 230 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-205ENST00000531042 GOLGA4Q13439 2230 aaKnown RBP16.11■□□□□ 0.17
CPSF1-205ENST00000531042 EPHB6O15197 1021 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 SLC31A1O15431 190 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 LEFTY1O75610 366 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 RFPL3O75679 317 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 TPM2P07951 284 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 CDK4P11802 303 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 PRLRP16471 622 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 SDC4P31431 198 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 ADRA1BP35368 520 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 ACADVLP49748 655 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 NRG1Q02297 640 aaPredicted RBP16.11■□□□□ 0.17
CPSF1-205ENST00000531042 CYP4F3Q08477 520 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 CDO1Q16878 200 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 C15orf59Q2T9L4 293 aaPredicted RBP16.11■□□□□ 0.17
CPSF1-205ENST00000531042 FKBP15Q5T1M5 1219 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 RBM43Q6ZSC3 357 aaKnown RBP16.11■□□□□ 0.17
CPSF1-205ENST00000531042 PHLDB2Q86SQ0 1253 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 DRC7Q8IY82 874 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 PCDH20Q8N6Y1 951 aaKnown RBP16.11■□□□□ 0.17
CPSF1-205ENST00000531042 PDCD7Q8N8D1 485 aaKnown RBP16.11■□□□□ 0.17
CPSF1-205ENST00000531042 JOSD2Q8TAC2 188 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 SLC30A5Q8TAD4 765 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 PPP1R16AQ96I34 528 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 MYOCQ99972 504 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 FANCLQ9NW38 375 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 OR12D3Q9UGF7 316 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 ZFR2Q9UPR6 939 aaKnown RBP16.11■□□□□ 0.17
CPSF1-205ENST00000531042 SIK3Q9Y2K2 1263 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 RAXQ9Y2V3 346 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 DAAM1Q9Y4D1 1078 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 WASF2Q9Y6W5 498 aa16.11■□□□□ 0.17
CPSF1-205ENST00000531042 CHD5Q8TDI0 1954 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 C2CD4BA6NLJ0 364 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 PCDH8O95206 1070 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 CD160O95971 181 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 THEGLP0DJG4 465 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 UNGP13051 313 aaPredicted RBP16.1■□□□□ 0.17
CPSF1-205ENST00000531042 PTPN9P43378 593 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 PTP4A2Q12974 167 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 ARL13BQ3SXY8 428 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 CARD16Q5EG05 197 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 MANEALQ5VSG8 457 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 C19orf48Q6RUI8 117 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 TRIM72Q6ZMU5 477 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 STRADAQ7RTN6 431 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 GPT2Q8TD30 523 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 HEPHQ9BQS7 1158 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 C11orf70Q9BRQ4 267 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 OSBPL2Q9H1P3 480 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 RETREG1Q9H6L5 497 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 CELSR3Q9NYQ7 3312 aa16.1■□□□□ 0.17
CPSF1-205ENST00000531042 ARID1BQ8NFD5 2236 aaPredicted RBP16.1■□□□□ 0.17
CPSF1-205ENST00000531042 CXorf51AA0A1B0GTR3 108 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 FAM72CH0Y354 149 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 SDC3O75056 442 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 GJB6O95452 261 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 HNRNPA2B1P22626 353 aaKnown RBP16.09■□□□□ 0.17
CPSF1-205ENST00000531042 ITGB7P26010 798 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 AKT2P31751 481 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 ACVRL1P37023 503 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 STAT1P42224 750 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 DNA2P51530 1060 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 NEK3P51956 506 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 CLDN6P56747 220 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 TMEM259Q4ZIN3 620 aa16.09■□□□□ 0.17
CPSF1-205ENST00000531042 FAM72AQ5TYM5 149 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms