RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 OAZ2O95190 189 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 PARNO95453 639 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 AP2A1O95782 977 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 C1QAP02745 245 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 FYNP06241 537 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 POLBP06746 335 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 CTSHP09668 335 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 SRGAP2BP0DMP2 458 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 NCAM1P13591 858 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 ERCC2P18074 760 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 TFE3P19532 575 aaPredicted RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 ACAT1P24752 427 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 CCNCP24863 283 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 CD52P31358 61 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 CCR1P32246 355 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 CRHR1P34998 444 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 RPA3P35244 121 aaPredicted RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 GARSP41250 739 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 POLD2P49005 469 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 NPY2RP49146 381 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 ACLYP53396 1101 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 SP3Q02447 781 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 YWHAHQ04917 246 aaPredicted RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 PRKCZQ05513 592 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 DSC1Q08554 894 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 MGAT5Q09328 741 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 IFRD2Q12894 506 aaPredicted RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 SLC10A2Q12908 348 aaPredicted RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 ELAVL2Q12926 359 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 RIPK1Q13546 671 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 PRPSAP1Q14558 356 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 LRRC14Q15048 493 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 INSCQ1MX18 579 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 GALNTL6Q49A17 601 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 RAB6CQ53S08 254 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 KIAA0319Q5VV43 1072 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 BSPRYQ5W0U4 402 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 FAM91A1Q658Y4 838 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 ATG16L1Q676U5 607 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 NAPEPLDQ6IQ20 393 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 TIGD7Q6NT04 549 aaPredicted RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 MSANTD2Q6P1R3 559 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 LVRNQ6Q4G3 990 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 UNC5AQ6ZN44 842 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 SH2D5Q6ZV89 423 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 ZNF534Q76KX8 674 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 ZNF438Q7Z4V0 828 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 CCDC91Q7Z6B0 441 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 SPATA2LQ8IUW3 424 aaPredicted RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 SLC43A3Q8NBI5 491 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 COLGALT1Q8NBJ5 622 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 ZMIZ2Q8NF64 920 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 CFAP61Q8NHU2 1237 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 GABPB2Q8TAK5 448 aaPredicted RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 GDAP1Q8TB36 358 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 MAGEC3Q8TD91 643 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 C2orf15Q8WU43 125 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 ZNF75CPQ92670 426 aaPredicted RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 MYLPFQ96A32 169 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 C8orf48Q96LL4 319 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 C1orf74Q96LT6 269 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 SERPINB11Q96P15 392 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 ADAM2Q99965 735 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 TRIM55Q9BYV6 548 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 RAB6CQ9H0N0 254 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 RNF208Q9H0X6 261 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 TRPV6Q9H1D0 765 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 GBA3Q9H227 469 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 SMOC2Q9H3U7 446 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 FBXO44Q9H4M3 255 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 PRDM12Q9H4Q4 367 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 RABEP2Q9H5N1 569 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 WDCPQ9H6R7 721 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 CATSPERBQ9H7T0 1116 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 LRRC40Q9H9A6 602 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 AGO3Q9H9G7 860 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 OLA1Q9NTK5 396 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 ARHGEF38Q9NXL2 777 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 BFARQ9NZS9 450 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 SRRDQ9UH36 339 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 MID2Q9UJV3 735 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 ABT1Q9ULW3 272 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 PHTF1Q9UMS5 762 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 SOX13Q9UN79 622 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 RPL26L1Q9UNX3 145 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 HIF3AQ9Y2N7 669 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 AAR2Q9Y312 384 aaKnown RBP5.69□□□□□ -1.5
PCF11-205ENST00000530906 MAD1L1Q9Y6D9 718 aa5.69□□□□□ -1.5
PCF11-205ENST00000530906 FAM237BA0A1B0GVD1 139 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 A0A1W2PPM1 405 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CASTOR2A6NHX0 329 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 WASH4PA8MWX3 477 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 TRIM49D1C9J1S8 452 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 I3L4J1 428 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 NRP1O14786 923 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 IRAK2O43187 625 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 HCRTO43612 131 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CREB3O43889 395 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 CACNG3O60359 315 aa5.68□□□□□ -1.5
PCF11-205ENST00000530906 GLRA3O75311 464 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms