RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	CKMT1A	P12532	417 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	TFE3	P19532	575 aa	Predicted RBP	11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	RECQL	P46063	649 aa	Predicted RBP	11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	CXCR3	P49682	368 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DNA2	P51530	1060 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	OLFML1	Q6UWY5	402 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	LRRC31	Q6UY01	552 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	GBP6	Q6ZN66	633 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ERN2	Q76MJ5	926 aa	Known RBP	11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ERICH1	Q86X53	443 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ZNF843	Q8N446	348 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	LSM14A	Q8ND56	463 aa	Known RBP	11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	C1orf131	Q8NDD1	294 aa	Known RBP	11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ZNF248	Q8NDW4	579 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	GRIN3A	Q8TCU5	1115 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	BMF	Q96LC9	184 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	SLC17A9	Q9BYT1	436 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	PLCB1	Q9NQ66	1216 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	TMPRSS4	Q9NRS4	437 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	PIGV	Q9NUD9	493 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DNAJC28	Q9NX36	388 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	4e-12	■■■■■ 53.2
PTP4A2-211	ENST00000528840	MPP6	Q9NZW5	540 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	IL36A	Q9UHA7	158 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	IPO11	Q9UI26	975 aa	Known RBP	11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	VPS51	Q9UID3	782 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	HS3ST3A1	Q9Y663	406 aa		11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.63	□□□□□ -0.55
PTP4A2-211	ENST00000528840	FAM170A	A1A519	330 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DRGX	A6NNA5	263 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840		I6L893	689 aa	Predicted RBP	11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840		K7ESM1	405 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	FOXN3	O00409	490 aa	Predicted RBP	11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	SCAMP1	O15126	338 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	CS	O75390	466 aa	Known RBP	11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DAB1	O75553	588 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	LEFTY1	O75610	366 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	PON1	P27169	355 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	OR1E1	P30953	314 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	SULT1E1	P49888	294 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DUSP3	P51452	185 aa	Predicted RBP	11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	GABRE	P78334	506 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DEUP1	Q05D60	604 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	EXOC3L4	Q17RC7	722 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	CDCP2	Q5VXM1	449 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	GCNT7	Q6ZNI0	430 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DPY19L3	Q6ZPD9	716 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	TFAP2D	Q7Z6R9	452 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	SETD3	Q86TU7	594 aa	Predicted RBP	11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	SLC47A2	Q86VL8	602 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ZNF683	Q8IZ20	524 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	LSMEM2	Q8N112	164 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	SLC22A18AS	Q8N1D0	253 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	OR7D4	Q8NG98	312 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	SHC3	Q92529	594 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	FEM1C	Q96JP0	617 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	C1orf74	Q96LT6	269 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ZNF578	Q96N58	590 aa	Predicted RBP	11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DEPDC7	Q96QD5	511 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	NPY6R	Q99463	290 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	HDAC8	Q9BY41	377 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	PDCL3	Q9H2J4	239 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ARHGEF38	Q9NXL2	777 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	NLGN3	Q9NZ94	848 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	APEX2	Q9UBZ4	518 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DNAJC12	Q9UKB3	198 aa		11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	TDRD6	O60522	2096 aa	Known RBP	11.62	□□□□□ -0.55
PTP4A2-211	ENST00000528840	CPED1	A4D0V7	1026 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	POM121B	A6NF01	834 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	GADD45B	O75293	160 aa	Predicted RBP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ZNF821	O75541	412 aa	Predicted RBP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	F9	P00740	461 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	PLA2G2A	P14555	144 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	CLCN1	P35523	988 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	LSS	P48449	732 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	RPS21	P63220	83 aa	Known RBP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	CFHR1	Q03591	330 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	FGL2	Q14314	439 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	PTPN20	Q4JDL3	420 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	TAF1B	Q53T94	588 aa	Predicted RBP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	BRMS1L	Q5PSV4	323 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ARHGAP40	Q5TG30	622 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	OTUD1	Q5VV17	481 aa	Predicted RBP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	BROX	Q5VW32	411 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	SLC26A9	Q7LBE3	791 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ABI3BP	Q7Z7G0	1075 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DCP2	Q8IU60	420 aa	Known RBP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	ZNF397	Q8NF99	534 aa	Predicted RBP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	IFI44	Q8TCB0	444 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	MAPK15	Q8TD08	544 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	IFT43	Q96FT9	208 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	TBCB	Q99426	244 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	DUSP23	Q9BVJ7	150 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	CPNE5	Q9HCH3	593 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	RRN3	Q9NYV6	651 aa		11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.61	□□□□□ -0.55
PTP4A2-211	ENST00000528840	IGSF10	Q6WRI0	2623 aa		11.61	□□□□□ -0.55

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