RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12	□□□□□ -0.49
PSMC3-205	ENST00000528362	DPY19L3	Q6ZPD9	716 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	PIP4P1	Q86T03	277 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	PCDH20	Q8N6Y1	951 aa	Known RBP	12	□□□□□ -0.49
PSMC3-205	ENST00000528362	DEFB124	Q8NES8	71 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	TMIE	Q8NEW7	156 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	GRIN3A	Q8TCU5	1115 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	12	□□□□□ -0.49
PSMC3-205	ENST00000528362	MAGEH1	Q9H213	219 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	IL21R	Q9HBE5	538 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	MYO1A	Q9UBC5	1043 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	AP4E1	Q9UPM8	1137 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	FNDC3A	Q9Y2H6	1198 aa	Known RBP	12	□□□□□ -0.49
PSMC3-205	ENST00000528362	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12	□□□□□ -0.49
PSMC3-205	ENST00000528362	SCIN	Q9Y6U3	715 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	WASF2	Q9Y6W5	498 aa		12	□□□□□ -0.49
PSMC3-205	ENST00000528362	PCDH15	Q96QU1	1955 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362		A0A087X0T9	212 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	KPNA3	O00505	521 aa	Predicted RBP	11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	LAT	O43561	262 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	LRCH4	O75427	683 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	PRNP	P04156	253 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	TPM3	P06753	285 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	FAM228B	P0C875	321 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	MIP	P30301	263 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	CASP14	P31944	242 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	DNA2	P51530	1060 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	TAS2R38	P59533	333 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	KIF19	Q2TAC6	998 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	KCNT1	Q5JUK3	1230 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	PIP5KL1	Q5T9C9	394 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	LEKR1	Q6ZMV7	388 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	RNF214	Q8ND24	703 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	ARRDC3	Q96B67	414 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	HMCES	Q96FZ2	354 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	SLC6A18	Q96N87	628 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	SNRNP25	Q9BV90	132 aa	Known RBP	11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	TM6SF2	Q9BZW4	377 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	KLC2	Q9H0B6	622 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	THAP2	Q9H0W7	228 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	KDM4C	Q9H3R0	1056 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	GAREM1	Q9H706	876 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	CATSPERB	Q9H7T0	1116 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	ARHGAP20	Q9P2F6	1191 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	IL36A	Q9UHA7	158 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	PCSK1N	Q9UHG2	260 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	NENF	Q9UMX5	172 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	ANKRD6	Q9Y2G4	727 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	NUMA1	Q14980	2115 aa		11.99	□□□□□ -0.49
PSMC3-205	ENST00000528362	NUP205	Q92621	2012 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	WNT9A	O14904	365 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	FGF10	O15520	208 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	KDELR3	O43731	214 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	PRPSAP2	O60256	369 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	LEFTY1	O75610	366 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	RNF8	O76064	485 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	CEACAM1	P13688	526 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	HNRNPH3	P31942	346 aa	Known RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	HTR7	P34969	479 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	RECQL	P46063	649 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	CCNH	P51946	323 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	GEMIN4	P57678	1058 aa	Known RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	TPI1	P60174	286 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	RACK1	P63244	317 aa	Known RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	SLC14A1	Q13336	389 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	TEAD4	Q15561	434 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	HLA-B	Q31612	363 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	CARD16	Q5EG05	197 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	ARSI	Q5FYB1	569 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	ERMARD	Q5T6L9	678 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	SPECC1L	Q69YQ0	1117 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	IL27RA	Q6UWB1	636 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	VPS36	Q86VN1	386 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	UMODL1-AS1	Q8N2C9	162 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	VOPP1	Q96AW1	172 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	ISG20	Q96AZ6	181 aa	Known RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	KCTD15	Q96SI1	283 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	DHX35	Q9H5Z1	703 aa	Known RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	MRPL47	Q9HD33	250 aa	Known RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	TPX2	Q9ULW0	747 aa	Known RBP	11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	HPCAL4	Q9UM19	191 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.98	□□□□□ -0.49	8e-9	■■■■□ 21.5
PSMC3-205	ENST00000528362	SNX11	Q9Y5W9	270 aa		11.98	□□□□□ -0.49
PSMC3-205	ENST00000528362	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	TBC1D3D	A0A087WVF3	549 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	TBC1D3I	A0A087WXS9	549 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	TBC1D3E	A0A087X179	549 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	TBC1D3K	A0A087X1G2	549 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362		A0A1W2PR77	199 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	EIF3CL	B5ME19	914 aa	Known RBP	11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	TBC1D3L	B9A6J9	549 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	RASA4B	C9J798	803 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	EEF2K	O00418	725 aa	Known RBP	11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	VILL	O15195	856 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	RASA4	O43374	803 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	CBFA2T2	O43439	604 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	SH3BP5	O60239	455 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	TMCC1	O94876	653 aa		11.97	□□□□□ -0.49
PSMC3-205	ENST00000528362	CER1	O95813	267 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms