RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CBX4O00257 560 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 BNIP3LO60238 219 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 ZMPSTE24O75844 475 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 C1SP09871 688 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 ATXN1LP0C7T5 689 aaKnown RBP14.5□□□□□ -0.09
CAPN1-212ENST00000527887 RHOQP17081 205 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 RRM1P23921 792 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 NUMBP49757 651 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 KLK7P49862 253 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 ZNF165P49910 485 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 SERPINH1P50454 418 aaKnown RBP14.5□□□□□ -0.09
CAPN1-212ENST00000527887 METAP1P53582 386 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 PPP2CBP62714 309 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 PPP2CAP67775 309 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 UBXN1Q04323 297 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 PPP1R2P3Q6NXS1 205 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 C22orf39Q6P5X5 142 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 ERN2Q76MJ5 926 aaKnown RBP14.5□□□□□ -0.09
CAPN1-212ENST00000527887 PHF13Q86YI8 300 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-212ENST00000527887 EMC1Q8N766 993 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 SAP25Q8TEE9 199 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 ANP32BQ92688 251 aaKnown RBP14.5□□□□□ -0.09
CAPN1-212ENST00000527887 NTAN1Q96AB6 310 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 ISG20Q96AZ6 181 aaKnown RBP14.5□□□□□ -0.09
CAPN1-212ENST00000527887 MAGEH1Q9H213 219 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 ATP13A1Q9HD20 1204 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 IL36AQ9UHA7 158 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 FREM2Q5SZK8 3169 aa14.5□□□□□ -0.09
CAPN1-212ENST00000527887 CABIN1Q9Y6J0 2220 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 SIGLEC16A6NMB1 481 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 SRRM3A6NNA2 597 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-212ENST00000527887 K7ERQ8 282 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 KPNA3O00505 521 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-212ENST00000527887 WNT9AO14904 365 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 EPHB6O15197 1021 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 SMAD6O43541 496 aaKnown RBP14.49□□□□□ -0.09
CAPN1-212ENST00000527887 LDOC1O95751 146 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-212ENST00000527887 CAPNS1P04632 268 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 CTSLP07711 333 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 AIF1P55008 147 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 TAS2R38P59533 333 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
CAPN1-212ENST00000527887 PTP4A2Q12974 167 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 CLEC16AQ2KHT3 1053 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 ANO6Q4KMQ2 910 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 CARD16Q5EG05 197 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 PIP5KL1Q5T9C9 394 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 MANEALQ5VSG8 457 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 C3orf20Q8ND61 904 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 OR7D4Q8NG98 312 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 SLC30A5Q8TAD4 765 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 LRIG1Q96JA1 1093 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 HEPHQ9BQS7 1158 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 C11orf70Q9BRQ4 267 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 SELENOOQ9BVL4 669 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 TMPRSS4Q9NRS4 437 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 TMEM248Q9NWD8 314 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 HPCAL4Q9UM19 191 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 WDFY3Q8IZQ1 3526 aa14.49□□□□□ -0.09
CAPN1-212ENST00000527887 ANKRD62A6NC57 917 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 ZSCAN5CA6NGD5 496 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 PLK4O00444 970 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 PLEKP08567 350 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 DESP17661 470 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 EPHA8P29322 1005 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 MAT2AP31153 395 aaKnown RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 AKT2P31751 481 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 SCAPQ12770 1279 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 ILKQ13418 452 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 SHBQ15464 509 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 SMAD1Q15797 465 aaKnown RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 CDO1Q16878 200 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 C15orf59Q2T9L4 293 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 ARSIQ5FYB1 569 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 RWDD4Q6NW29 188 aaKnown RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 LINGO4Q6UY18 593 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 DPY19L3Q6ZPD9 716 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 NLRP14Q86W24 1093 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 HORMAD1Q86X24 394 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 DCP2Q8IU60 420 aaKnown RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 TMEM145Q8NBT3 493 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 JOSD2Q8TAC2 188 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 FAM172AQ8WUF8 416 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 TBC1D31Q96DN5 1066 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 KLHDC7BQ96G42 594 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 PCDHB18PQ96TA0 734 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 CCDC86Q9H6F5 360 aaKnown RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 DONSONQ9NYP3 566 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 MYO6Q9UM54 1294 aa14.48□□□□□ -0.09
CAPN1-212ENST00000527887 DSPP15924 2871 aaKnown RBP14.48□□□□□ -0.09
CAPN1-212ENST00000527887 ANKRD11Q6UB99 2663 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-212ENST00000527887 A0A1W2PQU0 124 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 ENC1O14682 589 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 AP1G1O43747 822 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 RAMP2O60895 175 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 ZNF821O75541 412 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-212ENST00000527887 LEFTY1O75610 366 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 FERP16591 822 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 GPD1P21695 349 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 HNRNPA2B1P22626 353 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms