RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 FYB2Q5VWT5 728 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 STRA8Q7Z7C7 330 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 LRRC49Q8IUZ0 686 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 KLHDC8BQ8IXV7 354 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 RNF168Q8IYW5 571 aaPredicted RBP17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 CFAP52Q8N1V2 620 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 CPNE1Q99829 537 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 FSD1LQ9BXM9 530 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 CRISPLD2Q9H0B8 497 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 SP110Q9HB58 689 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 NPHS2Q9NP85 383 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 NT5MQ9NPB1 228 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 MKS1Q9NXB0 559 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 STK38LQ9Y2H1 464 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 BACE2Q9Y5Z0 518 aa17.57■□□□□ 0.4
PCDHA6-202ENST00000527624 CCDC195A0A1B0GUA6 201 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 E2F8A0AVK6 867 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 MAGEB16A2A368 324 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 GJB5O95377 273 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 CRHR1P34998 444 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 GMPRP36959 345 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 TUFMP49411 452 aaKnown RBP17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 GEMP55040 296 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 DEFB103AP81534 67 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 RING1Q06587 406 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 ITKQ08881 620 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 SLC10A7Q0GE19 358 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 DENND5AQ6IQ26 1287 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 RFWD3Q6PCD5 774 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 KCNMB4Q86W47 210 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 FNIP2Q9P278 1114 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 TTC24A2A3L6 582 aaPredicted RBP17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 TROVE2P10155 538 aaKnown RBP eCLIP17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 CHRNA4P43681 627 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 PDE1CQ14123 709 aaPredicted RBP17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 E2F5Q15329 346 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 PPM1JQ5JR12 505 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 TEDDM1Q5T9Z0 273 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 TSSK1BQ9BXA7 367 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 LRMDAQ9H2I8 198 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 CYP4F11Q9HBI6 524 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 IARS2Q9NSE4 1012 aaKnown RBP17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 ZNF212Q9UDV6 495 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 DNMT3LQ9UJW3 386 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 GREB1Q4ZG55 1949 aa17.56■□□□□ 0.4
PCDHA6-202ENST00000527624 DRGXA6NNA5 263 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 RAMP2O60895 175 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 EZRP15311 586 aaKnown RBP17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 TACR2P21452 398 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 OR1E1P30953 314 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 ADRA1AP35348 466 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 ATP5C1P36542 298 aaKnown RBP17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 SPDYAQ5MJ70 313 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 C16orf46Q6P387 395 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 NLRP9Q7RTR0 991 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 CMC1Q7Z7K0 106 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 LGI2Q8N0V4 545 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 AUTS2Q8WXX7 1259 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 TOP1MTQ969P6 601 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 MRGPRX2Q96LB1 330 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 KIFC1Q9BW19 673 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 AFF4Q9UHB7 1163 aaKnown RBP17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 LAMA2P24043 3122 aaKnown RBP17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 ZNF840PA6NDX5 716 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 AP3B1O00203 1094 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 SOD2P04179 222 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 CLTBP09497 229 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 T-ENOLP0DO92 83 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 DNAJB2P25686 324 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 ITGB8P26012 769 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 TARSP26639 723 aaKnown RBP17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 ACVRL1P37023 503 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 ETFBP38117 255 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 RENBPP51606 427 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 HNRNPDQ14103 355 aaKnown RBP17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 POLD3Q15054 466 aaPredicted RBP17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 GRTP1Q5TC63 336 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 MARC1Q5VT66 337 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 ZNF449Q6P9G9 518 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 CCDC91Q7Z6B0 441 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 AGAP11Q8TF27 550 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 TMEM169Q96HH4 297 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 ZNF558Q96NG5 402 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 RBBP8Q99708 897 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 HAO1Q9UJM8 370 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 DCTN4Q9UJW0 460 aa17.55■□□□□ 0.4
PCDHA6-202ENST00000527624 COL4A6Q14031 1691 aa17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 A8MUI8 341 aa17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 HMGA1P17096 107 aaKnown RBP17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 TYK2P29597 1187 aa17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 SLC6A4P31645 630 aa17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 KPNA1P52294 538 aaPredicted RBP17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 WNT3AP56704 352 aa17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 DCLK2Q8N568 766 aa17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 SLC25A41Q8N5S1 370 aa17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 ZNF461Q8TAF7 563 aa17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 UTP4Q969X6 686 aaKnown RBP17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 RAB3IPQ96QF0 476 aaPredicted RBP17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 DONSONQ9NYP3 566 aa17.54■□□□□ 0.4
PCDHA6-202ENST00000527624 HBS1LQ9Y450 684 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms