RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 TMPRSS4Q9NRS4 437 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.72□□□□□ -0.37
CAPN1-208ENST00000527323 ADA2Q9NZK5 511 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 ZNF487B1APH4 448 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 HCRTO43612 131 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 PENKP01210 267 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-208ENST00000527323 SETSIPP0DME0 302 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 ARF4P18085 180 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-208ENST00000527323 LIMK2P53671 638 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 NAGLUP54802 743 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 COG7P83436 770 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 PDK1Q15118 436 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 DGKDQ16760 1214 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 PLPPR4Q7Z2D5 763 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 ADCY4Q8NFM4 1077 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 ZSCAN18Q8TBC5 510 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-208ENST00000527323 NDRG1Q92597 394 aaKnown RBP12.72□□□□□ -0.37
CAPN1-208ENST00000527323 C20orf96Q9NUD7 363 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-208ENST00000527323 KLK14Q9P0G3 267 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 HBP1O60381 514 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 C22orf31O95567 290 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 MPOP05164 745 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 CCDC130P13994 396 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 TFEBP19484 476 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 GRIA4P48058 902 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 MYBPC1Q00872 1141 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 NOGQ13253 232 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 CEACAM7Q14002 265 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 ZNF423Q2M1K9 1284 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 ARL13AQ5H913 290 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-208ENST00000527323 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 FAM156AQ8NDB6 213 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 PPTC7Q8NI37 304 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 TMEM40Q8WWA1 233 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 WNT8BQ93098 351 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 EME1Q96AY2 570 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 MFSD3Q96ES6 412 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 EFCAB1Q9HAE3 211 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 IARS2Q9NSE4 1012 aaKnown RBP12.71□□□□□ -0.37
CAPN1-208ENST00000527323 ADAM28Q9UKQ2 775 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 VANGL2Q9ULK5 521 aa12.71□□□□□ -0.37
CAPN1-208ENST00000527323 MATN2O00339 956 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 SMIM10L2AP0DMW4 78 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 SMIM10L2BP0DMW5 78 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 SULT1E1P49888 294 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 PGGT1BP53609 377 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 MPP3Q13368 585 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 NRF1Q16656 503 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 DCAF6Q58WW2 860 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 TP53INP2Q8IXH6 220 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 LILRA2Q8N149 483 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 TRIML2Q8N7C3 387 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 CCNYL1Q8N7R7 359 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 PDCD6IPQ8WUM4 868 aaKnown RBP12.71□□□□□ -0.38
CAPN1-208ENST00000527323 ACE2Q9BYF1 805 aaPredicted RBP12.71□□□□□ -0.38
CAPN1-208ENST00000527323 DPEP3Q9H4B8 488 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 EIF2B3Q9NR50 452 aaKnown RBP12.71□□□□□ -0.38
CAPN1-208ENST00000527323 RHBDL2Q9NX52 303 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 CDYLQ9Y232 598 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 SLC45A1Q9Y2W3 748 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 RAP2CQ9Y3L5 183 aa12.71□□□□□ -0.38
CAPN1-208ENST00000527323 PPEF2O14830 753 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 TPH1P17752 444 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 FCGRTP55899 365 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 FSCN1Q16658 493 aaKnown RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 PKDCCQ504Y2 493 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 SLC26A9Q7LBE3 791 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 AHI1Q8N157 1196 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 RNF169Q8NCN4 708 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 DDI1Q8WTU0 396 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 NPAS2Q99743 824 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 AP5M1Q9H0R1 490 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 SEMA6AQ9H2E6 1030 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 TK2O00142 265 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 PPARGP37231 505 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 AVPR1AP37288 418 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 TM4SF4P48230 202 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 CDKL1Q00532 357 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 NME3Q13232 169 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 PIGGQ5H8A4 983 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 CERCAMQ5T4B2 595 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 AMIGO2Q86SJ2 522 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 SETD3Q86TU7 594 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 DEFB106AQ8N104 65 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 RNF139Q8WU17 664 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 ABTB1Q969K4 478 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 EPS15L1Q9UBC2 864 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 RIMS3Q9UJD0 308 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 MID2Q9UJV3 735 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 DMTF1Q9Y222 760 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 RUVBL2Q9Y230 463 aaKnown RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 FIS1Q9Y3D6 152 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 H3BSA7 217 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 PDLIM1O00151 329 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 PHGDHO43175 533 aaKnown RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 H2AFYO75367 372 aaKnown RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 CYP2C9P11712 490 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 PSMC3P17980 439 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 AKAP5P24588 427 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms