RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CDK12Q9NYV4 1490 aaPredicted RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ADCY9O60503 1353 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 WDR17Q8IZU2 1322 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 GOLGA8QA0A0J9YX86 632 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 TLDC2A0PJX2 215 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ARHGAP10A1A4S6 786 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 GOLGA8OA6NCC3 632 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 EIF4E1BA6NMX2 242 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 PRSS47A8MTI9 375 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 F8W810 466 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 GOLGA8NF8WBI6 632 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 H3BQV1 296 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 O00370 1275 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 IFRD1O00458 451 aaPredicted RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 APOL1O14791 398 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 XPO1O14980 1071 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 AREL1O15033 823 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 BET1O15155 118 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 AQP9O43315 295 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ATP2C2O75185 946 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 DAB1O75553 588 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 RSL1D1O76021 490 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 DDHD2O94830 711 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 PCDH8O95206 1070 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 HMGN1P05114 100 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 RETP07949 1114 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 CLEC2LP0C7M8 214 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 MYZAPP0CAP1 466 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 RARBP10826 455 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 KRT13P13646 458 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 AXLP30530 894 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ADSLP30566 484 aaPredicted RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 PKLRP30613 574 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 HPDP32754 393 aaPredicted RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 HNF1BP35680 557 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 NUDT1P36639 197 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 CASP2P42575 452 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 EIF2B2P49770 351 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 HNRNPMP52272 730 aaKnown RBP eCLIP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 IST1P53990 364 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 P2RX3P56373 397 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 SRP54P61011 504 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 NAA20P61599 178 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 NOP14P78316 857 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 CYP4F2P78329 520 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 OCA2Q04671 838 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 GOLGA8FQ08AF8 430 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 GOLGA8DPQ0D2H9 430 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 LRRC74AQ0VAA2 488 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 STK4Q13043 487 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 STK3Q13188 491 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 MTX1Q13505 466 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 TRIM14Q14142 442 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 KARSQ15046 597 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 STK38Q15208 465 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 TOMM20Q15388 145 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 NPTX1Q15818 432 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 TMEM266Q2M3C6 531 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 Q3ZCU0 254 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 FAM133BQ5BKY9 247 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF569Q5MCW4 686 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC10A5Q5PT55 438 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 CLVS2Q5SYC1 327 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 HYIQ5T013 277 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 RESP18Q5W5W9 173 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 EFCAB12Q6NXP0 572 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC129Q6ZRS4 1044 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 TOGARAM2Q6ZUX3 1019 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 RAPH1Q70E73 1250 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 CPLX4Q7Z7G2 160 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 TMTC1Q8IUR5 882 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 NKAIN4Q8IVV8 208 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 FAM9CQ8IZT9 166 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC35F6Q8N357 371 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 RIBC1Q8N443 379 aaPredicted RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 RNF169Q8NCN4 708 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 ENKURQ8TC29 256 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 GIPC3Q8TF64 312 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 RAPGEF5Q92565 580 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 FERMT2Q96AC1 680 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 TTC17Q96AE7 1141 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 HSPBAP1Q96EW2 488 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC39A13Q96H72 371 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 PBKQ96KB5 322 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 TNIP3Q96KP6 325 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 CEP170P1Q96L14 293 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 NLRP4Q96MN2 994 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 BIRC8Q96P09 236 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 VPS35Q96QK1 796 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 XPO6Q96QU8 1125 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 SERINC2Q96SA4 455 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 IFIH1Q9BYX4 1025 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 BRINP2Q9C0B6 783 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 KLK15Q9H2R5 256 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 RAD21L1Q9H4I0 556 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 DENND2DQ9H6A0 471 aaPredicted RBP3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC134Q9H6E4 229 aa3.82□□□□□ -1.8
CLNS1A-209ENST00000527299 C10orf88Q9H8K7 445 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms