RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 EXOC1LA0A1B0GW35 172 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 NCAM2O15394 837 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 HOXD9P28356 352 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 LSP1P33241 339 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 GARSP41250 739 aaKnown RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 MAGEA6P43360 314 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 AP1B1Q10567 949 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 ZNF177Q13360 481 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 MPPE1Q53F39 396 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 TRIM68Q6AZZ1 485 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 PARM1Q6UWI2 310 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 VITQ6UXI7 678 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 PALM2Q8IXS6 379 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 OSCP1Q8WVF1 389 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 ARHGEF2Q92974 986 aaKnown RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 OTUB2Q96DC9 234 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 ZFYVE19Q96K21 471 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 FRMD8Q9BZ67 464 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 DUS2Q9NX74 493 aaKnown RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 OBP2AQ9NY56 170 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 LGALS13Q9UHV8 139 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 RAD54BQ9Y620 910 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 SLC9A3R1O14745 358 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 PPP1R12AO14974 1030 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 RAMP2O60895 175 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 APRTP07741 180 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 MX2P20592 715 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 PHBP35232 272 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 NDST2P52849 883 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 PRKD1Q15139 912 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 MPP7Q5T2T1 576 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 FYB2Q5VWT5 728 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 ARHGAP36Q6ZRI8 547 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 ARHGEF18Q6ZSZ5 1173 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 C3orf62Q6ZUJ4 267 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 CARNMT1Q8N4J0 409 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 ATP11CQ8NB49 1132 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 MDM1Q8TC05 714 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 DEPDC1BQ8WUY9 529 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 IRF7Q92985 503 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 ASIC4Q96FT7 647 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 SELENOSQ9BQE4 189 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 FERMT1Q9BQL6 677 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 WDR83Q9BRX9 315 aaKnown RBP19.15■□□□□ 0.66
SMPD1-203ENST00000527275 RETREG1Q9H6L5 497 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 SPHK2Q9NRA0 654 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 TBK1Q9UHD2 729 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 CLEC4EQ9ULY5 219 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 TBC1D30Q9Y2I9 924 aa19.15■□□□□ 0.66
SMPD1-203ENST00000527275 A0A0D9SEW6 157 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 H0Y626 953 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 CYBBP04839 570 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 SSTR1P30872 391 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 POLD3Q15054 466 aaPredicted RBP19.14■□□□□ 0.65
SMPD1-203ENST00000527275 FSCBQ5H9T9 825 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 ANKRD20A2Q5SQ80 823 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 LY6G5CQ5SRR4 150 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 ANKRD20A1Q5TYW2 823 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 ANKRD20A3Q5VUR7 823 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 CYP4X1Q8N118 509 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 HLA-CQ95604 372 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 HMCESQ96FZ2 354 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 KXD1Q9BQD3 176 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 PLA2G2FQ9BZM2 168 aa19.14■□□□□ 0.65
SMPD1-203ENST00000527275 A0A0A0MRY4 1105 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 RASA4BC9J798 803 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 RASA4O43374 803 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 LUC7L3O95232 432 aaKnown RBP19.13■□□□□ 0.65
SMPD1-203ENST00000527275 ELK3P41970 407 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 PAPOLAP51003 745 aaKnown RBP19.13■□□□□ 0.65
SMPD1-203ENST00000527275 CBLBQ13191 982 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 CDH18Q13634 790 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 CXorf57Q6NSI4 855 aaKnown RBP19.13■□□□□ 0.65
SMPD1-203ENST00000527275 OTOP3Q7RTS5 596 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 RIBC1Q8N443 379 aaPredicted RBP19.13■□□□□ 0.65
SMPD1-203ENST00000527275 KIAA1958Q8N8K9 716 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 WFDC5Q8TCV5 224 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 SHROOM3Q8TF72 1996 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 HDAC11Q96DB2 347 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 SPATA13Q96N96 652 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 RPP25Q9BUL9 199 aaKnown RBP19.13■□□□□ 0.65
SMPD1-203ENST00000527275 BBS2Q9BXC9 721 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 NEDD8-MDP1E9PL57 170 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 POC1B-GALNT4F8VUJ3 575 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 MBTPS2O43462 519 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 AVILO75366 819 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 STK10O94804 968 aaKnown RBP19.13■□□□□ 0.65
SMPD1-203ENST00000527275 TSHRP16473 764 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 GCAP28676 217 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 PPIDQ08752 370 aaKnown RBP19.13■□□□□ 0.65
SMPD1-203ENST00000527275 SMAD4Q13485 552 aaKnown RBP19.13■□□□□ 0.65
SMPD1-203ENST00000527275 ZSCAN26Q16670 478 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 ANO4Q32M45 955 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 EML3Q32P44 896 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 SETD3Q86TU7 594 aaPredicted RBP19.13■□□□□ 0.65
SMPD1-203ENST00000527275 MFN1Q8IWA4 741 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 MFSD6LQ8IWD5 586 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 MCUQ8NE86 351 aa19.13■□□□□ 0.65
SMPD1-203ENST00000527275 EBF3Q9H4W6 596 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms