RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 NOS2P35228 1153 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 C21orf59P57076 290 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 RNASE9P60153 205 aaKnown RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 RACK1P63244 317 aaKnown RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 CCZ1BP86790 482 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 CCZ1P86791 482 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 E2F1Q01094 437 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 SHBQ15464 509 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 C10orf120Q5SQS8 335 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 C6orf132Q5T0Z8 1188 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 FAM102AQ5T9C2 384 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 KIAA1614Q5VZ46 1190 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 IGF2-ASQ6U949 168 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 CLEC18BQ6UXF7 455 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 TAC4Q86UU9 113 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 TMTC1Q8IUR5 882 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 EID2Q8N6I1 236 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 CLEC18CQ8NCF0 446 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 RXFP2Q8WXD0 754 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 FAM149B1Q96BN6 582 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 PGAP3Q96FM1 320 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 FCRL2Q96LA5 508 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 CCDC42Q96M95 316 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 MAGEB5Q9BZ81 275 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 ASCL3Q9NQ33 180 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 METTL5Q9NRN9 209 aaKnown RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 ZNHIT6Q9NWK9 470 aaKnown RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 MARCH2Q9P0N8 246 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 CNOT8Q9UFF9 292 aaKnown RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 EPN1Q9Y6I3 576 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 ANKRD62A6NC57 917 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 KCNU1A8MYU2 1149 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 EIF3CLB5ME19 914 aaKnown RBP11.24□□□□□ -0.61
NEDD8-204ENST00000526430 AKR1B10O60218 316 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 NDUFA10O95299 355 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 SEMA4FO95754 770 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 TRUB2O95900 331 aaKnown RBP11.24□□□□□ -0.61
NEDD8-204ENST00000526430 KRT3P12035 628 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 EPHA8P29322 1005 aaPredicted RBP11.24□□□□□ -0.61
NEDD8-204ENST00000526430 LSSP48449 732 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 SKOR1P84550 965 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 TCEAL1Q15170 157 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 DCAF6Q58WW2 860 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 KDM7AQ6ZMT4 941 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 FAM124AQ86V42 546 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 CCDC170Q8IYT3 715 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 EXD3Q8N9H8 876 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 UCMAQ8WVF2 138 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 SKA1Q96BD8 255 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 CFAP57Q96MR6 1250 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 TBCBQ99426 244 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 EIF3CQ99613 913 aaKnown RBP11.24□□□□□ -0.61
NEDD8-204ENST00000526430 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
NEDD8-204ENST00000526430 SYNCQ9H7C4 482 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 THSD1Q9NS62 852 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 KCNK4Q9NYG8 393 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.24□□□□□ -0.61
NEDD8-204ENST00000526430 SEPT3Q9UH03 358 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 XPO7Q9UIA9 1087 aaKnown RBP11.24□□□□□ -0.61
NEDD8-204ENST00000526430 SALL4Q9UJQ4 1053 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 STRIP2Q9ULQ0 834 aa11.24□□□□□ -0.61
NEDD8-204ENST00000526430 CENPEQ02224 2701 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 SLC12A8A0AV02 714 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 IRAK2O43187 625 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 MT-CO3P00414 261 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 MPOP05164 745 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 H2AFZP0C0S5 128 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 TMEM253P0C7T8 217 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 PTPN9P43378 593 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 CCR10P46092 362 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 ARRB1P49407 418 aaPredicted RBP11.23□□□□□ -0.61
NEDD8-204ENST00000526430 CXCR3P49682 368 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 SNX16P57768 344 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 GABREP78334 506 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 ZBTB16Q05516 673 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
NEDD8-204ENST00000526430 C15orf59Q2T9L4 293 aaPredicted RBP11.23□□□□□ -0.61
NEDD8-204ENST00000526430 SLC25A52Q3SY17 297 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 C4orf17Q53FE4 359 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 H2AFVQ71UI9 128 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 CPNE8Q86YQ8 564 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 OR2T3Q8NH03 318 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 ZNF653Q96CK0 615 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 MYEOVQ96EZ4 313 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 CCDC97Q96F63 343 aaPredicted RBP11.23□□□□□ -0.61
NEDD8-204ENST00000526430 PPP1R9BQ96SB3 815 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 LACRTQ9GZZ8 138 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 BTBD1Q9H0C5 482 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 KCNF1Q9H3M0 494 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 POLR1BQ9H9Y6 1135 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 TMPRSS4Q9NRS4 437 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 OLA1Q9NTK5 396 aaKnown RBP11.23□□□□□ -0.61
NEDD8-204ENST00000526430 PIGVQ9NUD9 493 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 PARVAQ9NVD7 372 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 RASAL2Q9UJF2 1139 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 STOML2Q9UJZ1 356 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 HBS1LQ9Y450 684 aaKnown RBP11.23□□□□□ -0.61
NEDD8-204ENST00000526430 PCDHB1Q9Y5F3 818 aa11.23□□□□□ -0.61
NEDD8-204ENST00000526430 GOLGA6L7A0A1B0GV03 622 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 M0QYT0 321 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms