RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SLC10A2Q12908 348 aaPredicted RBP13.17□□□□□ -0.3
SMPD1-202ENST00000526280 ELAVL3Q14576 367 aaKnown RBP13.17□□□□□ -0.3
SMPD1-202ENST00000526280 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 C22orf39Q6P5X5 142 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 Q6ZVU0 165 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 METTL3Q86U44 580 aaKnown RBP13.17□□□□□ -0.3
SMPD1-202ENST00000526280 RFX6Q8HWS3 928 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 LRRC49Q8IUZ0 686 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 REXO1L1PQ8IX06 675 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 PLPP6Q8IY26 295 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 STK40Q8N2I9 435 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 PGBD3Q8N328 593 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 PCDH20Q8N6Y1 951 aaKnown RBP13.17□□□□□ -0.3
SMPD1-202ENST00000526280 UBL4BQ8N7F7 174 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 PLD5Q8N7P1 536 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.17□□□□□ -0.3
SMPD1-202ENST00000526280 HES6Q96HZ4 224 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 FAM129BQ96TA1 746 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 SLC6A17Q9H1V8 727 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 PACSIN2Q9UNF0 486 aaPredicted RBP13.17□□□□□ -0.3
SMPD1-202ENST00000526280 FCF1Q9Y324 198 aaKnown RBP13.17□□□□□ -0.3
SMPD1-202ENST00000526280 FANCMQ8IYD8 2048 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 hCG_1818297A0A087WSY0 165 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 MCF2LO15068 1137 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 ALOX15BO15296 676 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
SMPD1-202ENST00000526280 MAFKO60675 156 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 LILRB5O75023 590 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 TMCC1O94876 653 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 KRT10P13645 584 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 GARSP41250 739 aaKnown RBP13.16□□□□□ -0.3
SMPD1-202ENST00000526280 RPS14P62263 151 aaKnown RBP13.16□□□□□ -0.3
SMPD1-202ENST00000526280 ZBTB16Q05516 673 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 GALNT2Q10471 571 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 TFDP2Q14188 446 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 CYTH1Q15438 398 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 PPP2R5EQ16537 467 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 CCDC50Q8IVM0 306 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 TRIM58Q8NG06 486 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 OR2A12Q8NGT7 310 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 PRCCQ92733 491 aaPredicted RBP13.16□□□□□ -0.3
SMPD1-202ENST00000526280 ATOH1Q92858 354 aaPredicted RBP13.16□□□□□ -0.3
SMPD1-202ENST00000526280 SIPA1Q96FS4 1042 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 TPSD1Q9BZJ3 242 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 TNKS2Q9H2K2 1166 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 SP110Q9HB58 689 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 DTLQ9NZJ0 730 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 UBA2Q9UBT2 640 aaPredicted RBP13.16□□□□□ -0.3
SMPD1-202ENST00000526280 EFR3BQ9Y2G0 817 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 EML5Q05BV3 1969 aa13.16□□□□□ -0.3
SMPD1-202ENST00000526280 HRO43593 1189 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 BNIP3LO60238 219 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 CST8O60676 142 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 RNASEH1O60930 286 aaKnown RBP13.15□□□□□ -0.3
SMPD1-202ENST00000526280 PEX11BO96011 259 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 PYGMP11217 842 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 MX2P20592 715 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 CNR2P34972 360 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 PTPN7P35236 360 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 DYNLT1P63172 113 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 ADCY2Q08462 1091 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 RFTN1Q14699 578 aaPredicted RBP13.15□□□□□ -0.3
SMPD1-202ENST00000526280 LLGL1Q15334 1064 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 USP39Q53GS9 565 aaKnown RBP13.15□□□□□ -0.3
SMPD1-202ENST00000526280 CARD16Q5EG05 197 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 DNTTIP2Q5QJE6 756 aaKnown RBP13.15□□□□□ -0.3
SMPD1-202ENST00000526280 MEI1Q5TIA1 1274 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 KAZNQ674X7 775 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 ZNF776Q68DI1 518 aaPredicted RBP13.15□□□□□ -0.3
SMPD1-202ENST00000526280 ZC3H14Q6PJT7 736 aaKnown RBP13.15□□□□□ -0.3
SMPD1-202ENST00000526280 KIAA1324Q6UXG2 1013 aaKnown RBP13.15□□□□□ -0.3
SMPD1-202ENST00000526280 DPY19L3Q6ZPD9 716 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 MMAAQ8IVH4 418 aaKnown RBP13.15□□□□□ -0.3
SMPD1-202ENST00000526280 ATPAF2Q8N5M1 289 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 OR8D1Q8WZ84 308 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 CCDC114Q96M63 670 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 ZNF599Q96NL3 588 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 TSGA13Q96PP4 275 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 ALS2CR12Q96Q35 445 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 ITM2CQ9NQX7 267 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 FAM86C1Q9NVL1 165 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 PPM1HQ9ULR3 514 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
SMPD1-202ENST00000526280 HEY1Q9Y5J3 304 aa13.15□□□□□ -0.3
SMPD1-202ENST00000526280 ZNF217O75362 1048 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 RPP40O75818 363 aaKnown RBP13.14□□□□□ -0.31
SMPD1-202ENST00000526280 MAP3K6O95382 1288 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 GSRP00390 522 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 CCNCP24863 283 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 CETN2P41208 172 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 P2RY2P41231 377 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 RECQLP46063 649 aaPredicted RBP13.14□□□□□ -0.31
SMPD1-202ENST00000526280 NR2C2P49116 596 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 DNA2P51530 1060 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 RHOAP61586 193 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 CST6Q15828 149 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 MAP7D1Q3KQU3 841 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 DCAF12L1Q5VU92 463 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 NPNTQ6UXI9 565 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 DSG4Q86SJ6 1040 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms