RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CT47A1Q5JQC4 288 aaPredicted RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 PERM1Q5SV97 790 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 TPRG1LQ5T0D9 272 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 CCDC183Q5T5S1 534 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 CDCP2Q5VXM1 449 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 TTI2Q6NXR4 508 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 GUSBP11Q6P575 273 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 GCNT7Q6ZNI0 430 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 DPY19L3Q6ZPD9 716 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 FAM183BPQ6ZVS7 135 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 ERN2Q76MJ5 926 aaKnown RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 EFL1Q7Z2Z2 1120 aaKnown RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 IQCHQ86VS3 1027 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 SLC22A18ASQ8N1D0 253 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 FAM181AQ8N9Y4 354 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 TMEM145Q8NBT3 493 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 C1orf131Q8NDD1 294 aaKnown RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 OR2A12Q8NGT7 310 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 OR6K2Q8NGY2 324 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 RFFLQ8WZ73 363 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 DHTKD1Q96HY7 919 aaPredicted RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 PPP1R13BQ96KQ4 1090 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 CEP63Q96MT8 703 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 DEPDC7Q96QD5 511 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 SLC17A9Q9BYT1 436 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 MAGEB5Q9BZ81 275 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 TKTL2Q9H0I9 626 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 NUP62CLQ9H1M0 184 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 TCEAL2Q9H3H9 227 aaPredicted RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 KDM4CQ9H3R0 1056 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 WDCPQ9H6R7 721 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 POLR1BQ9H9Y6 1135 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 PREBQ9HCU5 417 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 GULP1Q9UBP9 304 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 VPS51Q9UID3 782 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 KLF15Q9UIH9 416 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.73□□□□□ -1.33
CD44-221ENST00000526000 OR51B4Q9Y5P0 310 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 U3KQA8 63 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 NEMP2A6NFY4 417 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 BECN2A8MW95 431 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 I6L893 689 aaPredicted RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 NEMP1O14524 444 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 SPINT1O43278 529 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 IGLV3-25P01717 112 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 AFPP02771 609 aaKnown RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 ALPPL2P10696 532 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 SLC2A3P11169 496 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 CKMT1AP12532 417 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 JUNDP17535 347 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 BMP6P22004 513 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 RECQLP46063 649 aaPredicted RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 LSSP48449 732 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 SULT1E1P49888 294 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 DUSP3P51452 185 aaPredicted RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 ADKP55263 362 aaKnown RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 CDH4P55283 916 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 OXCT1P55809 520 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 TMPRSS3P57727 454 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 KRT83P78385 493 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 NFKB2Q00653 900 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 GCNT1Q02742 428 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 DEUP1Q05D60 604 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 VAC14Q08AM6 782 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 SRSF6Q13247 344 aaKnown RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 SGCGQ13326 291 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 EIF4EBP2Q13542 120 aaPredicted RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 PDE1CQ14123 709 aaPredicted RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 FZD2Q14332 565 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 NFKBIBQ15653 356 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 ISXQ2M1V0 245 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 LRRC73Q5JTD7 316 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 EFHC1Q5JVL4 640 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 FOXR2Q6PJQ5 311 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 RBM43Q6ZSC3 357 aaKnown RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 C11orf57Q6ZUT1 292 aaPredicted RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 RD3Q7Z3Z2 195 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 TRIM59Q8IWR1 403 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 DRC7Q8IY82 874 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 RBFAQ8N0V3 343 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 STK32AQ8WU08 396 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 HIC2Q96JB3 615 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 FEM1CQ96JP0 617 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 ZNF578Q96N58 590 aaPredicted RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 SLC2A13Q96QE2 648 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 PPP1R9BQ96SB3 815 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 TBCBQ99426 244 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 ANP32EQ9BTT0 268 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 TM6SF2Q9BZW4 377 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 TRIM4Q9C037 500 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 PDCL3Q9H2J4 239 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 ZDHHC6Q9H6R6 413 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 SYNCQ9H7C4 482 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 PIGVQ9NUD9 493 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 KIAA1468Q9P260 1216 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 IL36AQ9UHA7 158 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 GGT7Q9UJ14 662 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 AJAP1Q9UKB5 411 aaPredicted RBP6.72□□□□□ -1.33
CD44-221ENST00000526000 ITM2BQ9Y287 266 aa6.72□□□□□ -1.33
CD44-221ENST00000526000 FCF1Q9Y324 198 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms