RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PPP2CBP62714 309 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 PPP2CAP67775 309 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 SLC20A2Q08357 652 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 DPY19L3Q6ZPD9 716 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 RTL3Q8N8U3 475 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 NETO2Q8NC67 525 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 GRIN3AQ8TCU5 1115 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 TRIM11Q96F44 468 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 CCDC114Q96M63 670 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 SLC6A18Q96N87 628 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 EPAS1Q99814 870 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 TM6SF2Q9BZW4 377 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 KLC2Q9H0B6 622 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 MAGEH1Q9H213 219 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 NOL6Q9H6R4 1146 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 IL36AQ9UHA7 158 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 AP4E1Q9UPM8 1137 aa13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 BZW2Q9Y6E2 419 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-205ENST00000525079 A0A1W2PPC4 97 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 WNT9AO14904 365 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 BUB1O43683 1085 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 KDELR3O43731 214 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 TPM3P06753 285 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 MYBL1P10243 752 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 CD59P13987 128 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 MIPP30301 263 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 MAT2AP31153 395 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 GKP32189 559 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 ETFBP38117 255 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 AFF3P51826 1226 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 AIF1P55008 147 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 TPI1P60174 286 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 SEMA3BQ13214 749 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 TEAD4Q15561 434 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 KIF19Q2TAC6 998 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 HLA-BQ31612 363 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 CARD16Q5EG05 197 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 KCNT1Q5JUK3 1230 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 ERMARDQ5T6L9 678 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 AGBL4Q5VU57 503 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 VPS36Q86VN1 386 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 RYBPQ8N488 228 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 OR6K2Q8NGY2 324 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 IQCDQ96DY2 449 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 HMCESQ96FZ2 354 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 BTBD6Q96KE9 485 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 KCTD15Q96SI1 283 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 SNRNP25Q9BV90 132 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 THAP2Q9H0W7 228 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 RETREG1Q9H6L5 497 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 GAREM1Q9H706 876 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 DNAAF2Q9NVR5 837 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 ARHGAP20Q9P2F6 1191 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 HPCAL4Q9UM19 191 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 ANKRD6Q9Y2G4 727 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 SNX11Q9Y5W9 270 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 SCINQ9Y6U3 715 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 CACNA1AO00555 2505 aa13.1□□□□□ -0.31
TRAPPC4-205ENST00000525079 RASA4BC9J798 803 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 EEF2KO00418 725 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 RASA4O43374 803 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CBFA2T2O43439 604 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 PLRG1O43660 514 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 PRPSAP2O60256 369 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 LEFTY1O75610 366 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 PRNPP04156 253 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 ADRB1P08588 477 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 TCF4P15884 667 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CSRP1P21291 193 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 EIF4A3P38919 411 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CCR5P51681 352 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CCNHP51946 323 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 TAS2R38P59533 333 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 DNAH14Q0VDD8 3507 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CCDC122Q5T0U0 273 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 PIP5KL1Q5T9C9 394 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CYP4V2Q6ZWL3 525 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 ADAT2Q7Z6V5 191 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 PCDH20Q8N6Y1 951 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 TMIEQ8NEW7 156 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 KLK6Q92876 244 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CELF6Q96J87 481 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 HEPHQ9BQS7 1158 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 ZDHHC5Q9C0B5 715 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CEP44Q9C0F1 390 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 ZDHHC6Q9H6R6 413 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 CATSPERBQ9H7T0 1116 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 MRPL47Q9HD33 250 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 OSGEPQ9NPF4 335 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 DYRK4Q9NR20 520 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 AASDHPPTQ9NRN7 309 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 HECAQ9UBI9 543 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 WASF2Q9Y6W5 498 aa13.09□□□□□ -0.31
TRAPPC4-205ENST00000525079 SPAARA0A1B0GVQ0 90 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 WASH4PA8MWX3 477 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 SLC7A4O43246 635 aa13.08□□□□□ -0.32
TRAPPC4-205ENST00000525079 DAPK3O43293 454 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms