RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 EP400Q96L91 3159 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 GAKO14976 1311 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ZNF541Q9H0D2 1346 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 SALL1Q9NSC2 1324 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 COL4A3Q01955 1670 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 LAMB1P07942 1786 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CCDC88AQ3V6T2 1871 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CCDC187A0A096LP49 1063 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 A0A1B0GVL5 298 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 AGAP5A6NIR3 686 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 SLC38A8A6NNN8 435 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 E7EVH7 732 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 PSMD9O00233 223 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 NCAM2O15394 837 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 MPPED1O15442 326 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CTIFO43310 598 aaKnown RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 SUV39H1O43463 412 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ORC4O43929 436 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 PRAMEF2O60811 474 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 FAM155BO75949 473 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 URI1O94763 535 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 MBD3O95983 291 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 PEX11BO96011 259 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 GH2P01242 217 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CST5P28325 142 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 THBS4P35443 961 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CCT5P48643 541 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 DIO1P49895 249 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 GMPSP49915 693 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 PRELPP51888 382 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 UBE2HP62256 183 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 RAE1P78406 368 aaKnown RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 MRPS35P82673 323 aaKnown RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CXCL9Q07325 125 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 FSTL1Q12841 308 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 IKQ13123 557 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 BMPR2Q13873 1038 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CSHL1Q14406 222 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 DLGAP5Q15398 846 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 TAF12Q16514 161 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 UBE2SQ16763 222 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 SBK1Q52WX2 424 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CCDC183Q5T5S1 534 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ATPAF1Q5TC12 328 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 JAKMIP3Q5VZ66 844 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CCDC144NLQ6NUI1 221 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 NAPRTQ6XQN6 538 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 Q6ZPA2 131 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CCDC73Q6ZRK6 1079 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 TMTC3Q6ZXV5 915 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 RASAL3Q86YV0 1011 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 HERC6Q8IVU3 1022 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 DIS3L2Q8IYB7 885 aaKnown RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 NRSN1Q8IZ57 195 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 PDILTQ8N807 584 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 SIMC1Q8NDZ2 872 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CEP70Q8NHQ1 597 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 TBC1D22AQ8WUA7 517 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ASB12Q8WXK4 309 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 LINC00476Q8WZB0 136 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 LARP4BQ92615 738 aaKnown RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 NPIPB3Q92617 1050 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 PRMT6Q96LA8 375 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ZNF396Q96N95 335 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 PIGSQ96S52 555 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 EIF3CQ99613 913 aaKnown RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 TMEM47Q9BQJ4 181 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 LLPHQ9BRT6 129 aaKnown RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 DDX23Q9BUQ8 820 aaKnown RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ALG8Q9BVK2 526 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 AGXT2Q9BYV1 514 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ARHGAP39Q9C0H5 1083 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 TMEM39BQ9GZU3 492 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 OSBPL5Q9H0X9 879 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 TAOK3Q9H2K8 898 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 CCDC134Q9H6E4 229 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 DNAJC18Q9H819 358 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 RMI1Q9H9A7 625 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 USP29Q9HBJ7 922 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 RIC8AQ9NPQ8 531 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 DUSP22Q9NRW4 184 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ATP8A2Q9NTI2 1148 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 TMOD2Q9NZR1 351 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ZNF70Q9UC06 446 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 NKX1-2Q9UD57 310 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 ANAPC4Q9UJX5 808 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 GABRQQ9UN88 632 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 KIF3AQ9Y496 699 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 LRRC37AA6NMS7 1700 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 LTBP1Q14766 1721 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 DDX60LQ5H9U9 1706 aaKnown RBP2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 KIAA1551Q9HCM1 1747 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 MYH1P12882 1939 aa2.95□□□□□ -1.94
CKS1BP7-201ENST00000522230 PDS5AQ29RF7 1337 aaKnown RBP2.94□□□□□ -1.94
CKS1BP7-201ENST00000522230 WDR19Q8NEZ3 1342 aa2.94□□□□□ -1.94
CKS1BP7-201ENST00000522230 MYH6P13533 1939 aa2.94□□□□□ -1.94
CKS1BP7-201ENST00000522230 LOC105369274A0A096LPK9 316 aa2.94□□□□□ -1.94
CKS1BP7-201ENST00000522230 LOC102723532A0A0G2JNH3 316 aa2.94□□□□□ -1.94
CKS1BP7-201ENST00000522230 FSD2A1L4K1 749 aa2.94□□□□□ -1.94
CKS1BP7-201ENST00000522230 PP2D1A8MPX8 630 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms