RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 SLC13A1Q9BZW2 595 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 PRKAG3Q9UGI9 489 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 PMPCBO75439 489 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 SLC11A2P49281 568 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 IL10RBQ08334 325 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 SLC10A7Q0GE19 358 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 VEPH1Q14D04 833 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 PCID2Q5JVF3 399 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 CCDC117Q8IWD4 279 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 TEX26Q8N6G2 289 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 TRMT2BQ96GJ1 504 aaKnown RBP18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 MRGPRX2Q96LB1 330 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 KLHL5Q96PQ7 755 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 PLCD4Q9BRC7 762 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 KDM4CQ9H3R0 1056 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 MANSC1Q9H8J5 431 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 NT5MQ9NPB1 228 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 KIAA0355O15063 1070 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 ALDOAP04075 364 aaKnown RBP18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 RAG1P15918 1043 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 NMBRP28336 390 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 CRHR1P34998 444 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 SERPINB4P48594 390 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 TNK2Q07912 1038 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 PLD1Q13393 1074 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 SERINC3Q13530 473 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 FAM133BQ5BKY9 247 aaKnown RBP18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 TEDDM1Q5T9Z0 273 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 KCNMB4Q86W47 210 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 PLD4Q96BZ4 506 aa18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 IMP4Q96G21 291 aaKnown RBP18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 ALG13Q9NP73 1137 aaKnown RBP18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 C20orf96Q9NUD7 363 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC9-210ENST00000521667 SLC6A4P31645 630 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 HSP90AA5PQ58FG0 334 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 PKN3Q6P5Z2 889 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 KDELC1Q6UW63 502 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 RANBP10Q6VN20 620 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 TRPM8Q7Z2W7 1104 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 TMEM199Q8N511 208 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 CCDC63Q8NA47 563 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 RBBP8Q99708 897 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 RETREG1Q9H6L5 497 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 PRRG1O14668 218 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 TPP1O14773 563 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 ELF1P32519 619 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 WNT3AP56704 352 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 PDE1BQ01064 536 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 ITKQ08881 620 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 TWF1Q12792 350 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 LACTB2Q53H82 288 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 RFWD3Q6PCD5 774 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 POTEHQ6S545 545 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 STRA8Q7Z7C7 330 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 CFAP52Q8N1V2 620 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 PPHLN1Q8NEY8 458 aaKnown RBP18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 AUTS2Q8WXX7 1259 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 PTPRN2Q92932 1015 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 ZNF778Q96MU6 729 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 YME1L1Q96TA2 773 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 AGAP2Q99490 1192 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 KLHL14Q9P2G3 628 aa18.76■□□□□ 0.59
TRAPPC9-210ENST00000521667 SPRP35270 261 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 ACVRL1P37023 503 aa18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 PPP3CCP48454 512 aa18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 MAXP61244 160 aa18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 POU6F1Q14863 301 aa18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 PDPK2PQ6A1A2 396 aa18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 OTOAQ7RTW8 1153 aa18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 DENND1CQ8IV53 801 aa18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 PTCD2Q8WV60 388 aaKnown RBP18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 AZIN2Q96A70 460 aa18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 VPS45Q9NRW7 570 aa18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 MRPL17Q9NRX2 175 aaKnown RBP18.75■□□□□ 0.59
TRAPPC9-210ENST00000521667 STC2O76061 302 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 BAIAP3O94812 1187 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 NEFHP12036 1026 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 PPM1AP35813 382 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 LIMK2P53671 638 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 PCSK7Q16549 785 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 RABGAP1LQ5R372 815 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 TCEAL8Q8IYN2 117 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 ARMC2Q8NEN0 867 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 MRM3Q9HC36 420 aaKnown RBP18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 TCAF1Q9Y4C2 921 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 ZFP37Q9Y6Q3 630 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 DOCK4Q8N1I0 1966 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 PRAMEF11O60813 436 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 CORO1AP31146 461 aaKnown RBP18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 CD86P42081 329 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 CDH4P55283 916 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 PDE1CQ14123 709 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 LBRQ14739 615 aaKnown RBP18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 STXBP5Q5T5C0 1151 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 RNF43Q68DV7 783 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 KDELC2Q7Z4H8 507 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 DNAJB7Q7Z6W7 309 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 RNF38Q9H0F5 515 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 ATXN3LQ9H3M9 355 aa18.74■□□□□ 0.59
TRAPPC9-210ENST00000521667 ACTR5Q9H9F9 607 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms