RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 HEMK1Q9Y5R4 338 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 SLC4A4Q9Y6R1 1079 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 CNTNAP1P78357 1384 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 RPAP1Q9BWH6 1393 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.61□□□□□ -1.83
VPS13B-209ENST00000521559 LY6G6EA0A0G2JKS1 128 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 FAM90A10PA6NDY2 464 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 DDTLA6NHG4 134 aaPredicted RBP3.61□□□□□ -1.83
VPS13B-209ENST00000521559 PRAMEF2O60811 474 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 TULP3O75386 442 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 OAZ2O95190 189 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 PLAUP00749 431 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 HSPD1P10809 573 aaKnown RBP3.61□□□□□ -1.83
VPS13B-209ENST00000521559 SLC5A2P31639 672 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 NF2P35240 595 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 THBS4P35443 961 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 FOXG1P55316 489 aaPredicted RBP3.61□□□□□ -1.83
VPS13B-209ENST00000521559 FKBP1BP68106 108 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF543Q08ER8 600 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 AASDHQ4L235 1098 aaPredicted RBP3.61□□□□□ -1.83
VPS13B-209ENST00000521559 SBK1Q52WX2 424 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 GLE1Q53GS7 698 aaKnown RBP3.61□□□□□ -1.83
VPS13B-209ENST00000521559 C12orf60Q5U649 245 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 RRAGBQ5VZM2 374 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 CST9Q5W186 159 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 GRHL2Q6ISB3 625 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 DLK2Q6UY11 383 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 BHLHA9Q7RTU4 235 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 ARMC9Q7Z3E5 817 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 IRF2BP2Q7Z5L9 587 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF589Q86UQ0 364 aaPredicted RBP3.61□□□□□ -1.83
VPS13B-209ENST00000521559 TTC30AQ86WT1 665 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 CCDC33Q8N5R6 958 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 NRACQ8N912 160 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 SDR42E1Q8WUS8 393 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 PIGKQ92643 395 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 CDCA5Q96FF9 252 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 LRRC46Q96FV0 321 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 P2RY11Q96G91 374 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 VCPIP1Q96JH7 1222 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 TNIP3Q96KP6 325 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 SNX27Q96L92 541 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 SENP7Q9BQF6 1050 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 WACQ9BTA9 647 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 NACAP1Q9BZK3 213 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 TMEM39BQ9GZU3 492 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 OSBPL5Q9H0X9 879 aaPredicted RBP3.61□□□□□ -1.83
VPS13B-209ENST00000521559 MCM9Q9NXL9 1143 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 CTNNA3Q9UI47 895 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 SIRT4Q9Y6E7 314 aaPredicted RBP3.61□□□□□ -1.83
VPS13B-209ENST00000521559 MYH3P11055 1940 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 FLT1P17948 1338 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 CCDC171Q6TFL3 1326 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 RAD50Q92878 1312 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 PASKQ96RG2 1323 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 WDR90Q96KV7 1748 aa3.61□□□□□ -1.83
VPS13B-209ENST00000521559 ANO9A1A5B4 782 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 POM121BA6NF01 834 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 ZSCAN9O15535 394 aaPredicted RBP3.6□□□□□ -1.83
VPS13B-209ENST00000521559 EPB41L2O43491 1005 aaKnown RBP3.6□□□□□ -1.83
VPS13B-209ENST00000521559 EIF5BO60841 1220 aaKnown RBP3.6□□□□□ -1.83
VPS13B-209ENST00000521559 CELF2O95319 508 aaKnown RBP3.6□□□□□ -1.83
VPS13B-209ENST00000521559 NTN1O95631 604 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 HOXB6P17509 224 aaKnown RBP3.6□□□□□ -1.83
VPS13B-209ENST00000521559 DRD1P21728 446 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 PBX1P40424 430 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 PIK3CBP42338 1070 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 TDO2P48775 406 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 YPEL5P62699 121 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 GABPAQ06546 454 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 SEMA3BQ13214 749 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 BIRC2Q13490 618 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 GALEQ14376 348 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 EARS2Q5JPH6 523 aaKnown RBP3.6□□□□□ -1.83
VPS13B-209ENST00000521559 SYCP2LQ5T4T6 812 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 ABLIM2Q6H8Q1 611 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 CTR9Q6PD62 1173 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 CRTC1Q6UUV9 634 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF517Q6ZMY9 492 aaPredicted RBP3.6□□□□□ -1.83
VPS13B-209ENST00000521559 FAM57BQ71RH2 274 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 ACRBPQ8NEB7 543 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 WDR24Q96S15 920 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 EIF3CQ99613 913 aaKnown RBP3.6□□□□□ -1.83
VPS13B-209ENST00000521559 NUDT22Q9BRQ3 303 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 TUBB6Q9BUF5 446 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 NAPBQ9H115 298 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 IL25Q9H293 177 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 EBF3Q9H4W6 596 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 SAP30LQ9HAJ7 183 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 ABHD10Q9NUJ1 306 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 MYO1AQ9UBC5 1043 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 SWAP70Q9UH65 585 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 HERC5Q9UII4 1024 aaKnown RBP3.6□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF112Q9UJU3 913 aa3.6□□□□□ -1.83
VPS13B-209ENST00000521559 F8W810 466 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 H3BNX3 289 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 TRIM38O00635 465 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 APOL1O14791 398 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 REC8O95072 547 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 PCP11498 1178 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms