RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 SLC39A8Q9C0K1 460 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 ETNK2Q9NVF9 386 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 HAUS2Q9NVX0 235 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 POLR3BQ9NW08 1133 aaPredicted RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 UBA2Q9UBT2 640 aaPredicted RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 IPO11Q9UI26 975 aaKnown RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 SCML1Q9UN30 329 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 GOLGA6L9A6NEM1 432 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 H0Y858 1186 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 FTCDO95954 541 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 ADH1BP00325 375 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 GSRP00390 522 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 C7P10643 843 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 ACADMP11310 421 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 PTPN7P35236 360 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 CDKN2BP42772 138 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 MARCKSL1P49006 195 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 FNTBP49356 437 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 COPAP53621 1224 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 TAZQ16635 292 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 C9orf64Q5T6V5 341 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 SLC9A4Q6AI14 798 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 MFSD7Q6UXD7 560 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 BZW1Q7L1Q6 419 aaKnown RBP12.74□□□□□ -0.37
HDAC2-211ENST00000521233 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 BBS5Q8N3I7 341 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 PQLC3Q8N755 202 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 KRT35Q92764 455 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 ATOH1Q92858 354 aaPredicted RBP12.74□□□□□ -0.37
HDAC2-211ENST00000521233 SIPA1Q96FS4 1042 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 GDAP1L1Q96MZ0 367 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 RSPH9Q9H1X1 276 aaPredicted RBP12.74□□□□□ -0.37
HDAC2-211ENST00000521233 PDFQ9HBH1 243 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 EFR3BQ9Y2G0 817 aa12.74□□□□□ -0.37
HDAC2-211ENST00000521233 hCG_1818297A0A087WSY0 165 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 C1QTNF3-AMACRE9PGA6 284 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 MCF2LO15068 1137 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 TMCC1O94876 653 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 IGSF6O95976 241 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 MT-CO1P00395 513 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 DNTTP04053 509 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 PRNPP04156 253 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 TGM2P21980 687 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 HSPA9P38646 679 aaKnown RBP12.73□□□□□ -0.37
HDAC2-211ENST00000521233 GARSP41250 739 aaKnown RBP12.73□□□□□ -0.37
HDAC2-211ENST00000521233 PXNP49023 591 aaPredicted RBP12.73□□□□□ -0.37
HDAC2-211ENST00000521233 NR2C2P49116 596 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 RHOAP61586 193 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 SNRPD1P62314 119 aaKnown RBP12.73□□□□□ -0.37
HDAC2-211ENST00000521233 GALNT2Q10471 571 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 FAM46CQ5VWP2 391 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 TIGD7Q6NT04 549 aaPredicted RBP12.73□□□□□ -0.37
HDAC2-211ENST00000521233 TMPRSS6Q8IU80 811 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 PLD5Q8N7P1 536 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 OR2AP1Q8NGE2 309 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 GAB3Q8WWW8 586 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 PTPRN2Q92932 1015 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 FATE1Q969F0 183 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 HES6Q96HZ4 224 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 TPSD1Q9BZJ3 242 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 MKRN2Q9H000 416 aaKnown RBP12.73□□□□□ -0.37
HDAC2-211ENST00000521233 BRD8Q9H0E9 1235 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 SEMA4AQ9H3S1 761 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 FCF1Q9Y324 198 aaKnown RBP12.73□□□□□ -0.37
HDAC2-211ENST00000521233 MFHAS1Q9Y4C4 1052 aa12.73□□□□□ -0.37
HDAC2-211ENST00000521233 K7ERQ8 282 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 PPP1R12AO14974 1030 aaPredicted RBP12.72□□□□□ -0.37
HDAC2-211ENST00000521233 SMAD6O43541 496 aaKnown RBP12.72□□□□□ -0.37
HDAC2-211ENST00000521233 LILRB5O75023 590 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 RPP40O75818 363 aaKnown RBP12.72□□□□□ -0.37
HDAC2-211ENST00000521233 ZNF189O75820 626 aaPredicted RBP12.72□□□□□ -0.37
HDAC2-211ENST00000521233 CD160O95971 181 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 MAPK8P45983 427 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 PEX5P50542 639 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 RENBPP51606 427 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 GBE1Q04446 702 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 RAD51Q06609 339 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 ZNF33AQ06730 810 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 DMWDQ09019 674 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 ZNF235Q14590 738 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 GRM3Q14832 879 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 PDK1Q15118 436 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 CST6Q15828 149 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 CARD16Q5EG05 197 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 BBS12Q6ZW61 710 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 KBTBD6Q86V97 674 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 STK40Q8N2I9 435 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 OR2A12Q8NGT7 310 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 ALG3Q92685 438 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 HDAC11Q96DB2 347 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 PPP1R16AQ96I34 528 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 LRIG1Q96JA1 1093 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 CINPQ9BW66 212 aaPredicted RBP12.72□□□□□ -0.37
HDAC2-211ENST00000521233 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 DTLQ9NZJ0 730 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 USP36Q9P275 1121 aaKnown RBP12.72□□□□□ -0.37
HDAC2-211ENST00000521233 SEPT3Q9UH03 358 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 FANCMQ8IYD8 2048 aa12.72□□□□□ -0.37
HDAC2-211ENST00000521233 PLXND1Q9Y4D7 1925 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms