RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 ZNF211Q13398 564 aaPredicted RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 ELAVL3Q14576 367 aaKnown RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 LBRQ14739 615 aaKnown RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 STARD3Q14849 445 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 UBXN2BQ14CS0 331 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 SIX1Q15475 284 aaPredicted RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CRY1Q16526 586 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CYP1B1Q16678 543 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 LONRF2Q1L5Z9 754 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 SLC45A4Q5BKX6 768 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CCDC181Q5TID7 509 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 MARC1Q5VT66 337 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 KAZNQ674X7 775 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 C22orf39Q6P5X5 142 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 SERPINA13PQ6UXR4 307 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 C4orf22Q6V702 233 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 DSG4Q86SJ6 1040 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CREG2Q8IUH2 290 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CHPFQ8IZ52 775 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 ATP11CQ8NB49 1132 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 TMIEQ8NEW7 156 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 FRS2Q8WU20 508 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 PTPRN2Q92932 1015 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 PBXIP1Q96AQ6 731 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 RTP4Q96DX8 246 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CELF6Q96J87 481 aaKnown RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 RUNDC3BQ96NL0 473 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 QKIQ96PU8 341 aaKnown RBP eCLIP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 TUBGCP5Q96RT8 1024 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 SPON2Q9BUD6 331 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 HEMGNQ9BXL5 484 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 FAM126AQ9BYI3 521 aaPredicted RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CPEB1Q9BZB8 566 aaKnown RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 CD248Q9HCU0 757 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 POLMQ9NP87 494 aaPredicted RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 SEPT3Q9UH03 358 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 EBF1Q9UH73 591 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 TRHDEQ9UKU6 1024 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 NDRG2Q9UN36 371 aaKnown RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 FARP1Q9Y4F1 1045 aaPredicted RBP6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 HEY1Q9Y5J3 304 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 STON1Q9Y6Q2 735 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 FANCMQ8IYD8 2048 aa6.48□□□□□ -1.37
IGHV4-55-201ENST00000520889 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 C5orf60A6NFR6 353 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 J3KR12 359 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 ZBTB24O43167 697 aaPredicted RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 LIASO43766 372 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 SNAP91O60641 907 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 OPHN1O60890 802 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 ADAM23O75077 832 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 ZNF821O75541 412 aaPredicted RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 GCATO75600 419 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 ALDH1A2O94788 518 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 STK10O94804 968 aaKnown RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 TMCC1O94876 653 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 KLF8O95600 359 aaPredicted RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 POP4O95707 220 aaKnown RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 IGSF6O95976 241 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 PRNPP04156 253 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 RBP3P10745 1247 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 CCNB1P14635 433 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 PECAM1P16284 738 aaPredicted RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 CR2P20023 1033 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 CD72P21854 359 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 CHRNA3P32297 505 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 IL12RB1P42701 662 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 CTSOP43234 321 aaPredicted RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 MMP13P45452 471 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 RECQLP46063 649 aaPredicted RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 FNTAP49354 379 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 SUOXP51687 545 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 EIF3EP60228 445 aaKnown RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 AP1S1P61966 158 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 DYNLT1P63172 113 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 CCDC15Q0P6D6 951 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 BYSLQ13895 437 aaKnown RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 CYTH1Q15438 398 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 OASLQ15646 514 aaKnown RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 DLG2Q15700 870 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 P3H1Q32P28 736 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 ZNF528Q3MIS6 628 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 FNDC3BQ53EP0 1204 aaKnown RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 TEX44Q53QW1 395 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 CARD16Q5EG05 197 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 C9orf64Q5T6V5 341 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 EGFLAMQ63HQ2 1017 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 NAIF1Q69YI7 327 aaPredicted RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 HEATR6Q6AI08 1181 aaKnown RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 SYT10Q6XYQ8 523 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 ZNF572Q7Z3I7 529 aaPredicted RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 RASSF3Q86WH2 238 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 ALLCQ8N6M5 410 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 TXNDC5Q8NBS9 432 aaKnown RBP6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 FLCNQ8NFG4 579 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 OR2AP1Q8NGE2 309 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 OR2A12Q8NGT7 310 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 OR2T3Q8NH03 318 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 RPLP0P6Q8NHW5 317 aa6.47□□□□□ -1.37
IGHV4-55-201ENST00000520889 KIF18AQ8NI77 898 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms