RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 IL36AQ9UHA7 158 aa25.88■■□□□ 1.73
VEGFA-220ENST00000519767 GOLGA8CPA6NN73 597 aa25.87■■□□□ 1.73
VEGFA-220ENST00000519767 SRRM3A6NNA2 597 aaPredicted RBP25.87■■□□□ 1.73
VEGFA-220ENST00000519767 ZMPSTE24O75844 475 aa25.87■■□□□ 1.73
VEGFA-220ENST00000519767 CDK4P11802 303 aa25.87■■□□□ 1.73
VEGFA-220ENST00000519767 TAS2R38P59533 333 aa25.87■■□□□ 1.73
VEGFA-220ENST00000519767 SHBQ15464 509 aa25.87■■□□□ 1.73
VEGFA-220ENST00000519767 C22orf39Q6P5X5 142 aa25.87■■□□□ 1.73
VEGFA-220ENST00000519767 PCDH20Q8N6Y1 951 aaKnown RBP25.87■■□□□ 1.73
VEGFA-220ENST00000519767 ERGIC2Q96RQ1 377 aa25.87■■□□□ 1.73
VEGFA-220ENST00000519767 C11orf70Q9BRQ4 267 aa25.87■■□□□ 1.73
VEGFA-220ENST00000519767 FREM2Q5SZK8 3169 aa25.87■■□□□ 1.73
VEGFA-220ENST00000519767 FAM208BQ5VWN6 2430 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 CAPNS1P04632 268 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 CALB1P05937 261 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 RHOQP17081 205 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 SERPINH1P50454 418 aaKnown RBP25.86■■□□□ 1.73
VEGFA-220ENST00000519767 GSCP56915 257 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-220ENST00000519767 SCAPQ12770 1279 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 CDO1Q16878 200 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 ARSIQ5FYB1 569 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 ERN2Q76MJ5 926 aaKnown RBP25.86■■□□□ 1.73
VEGFA-220ENST00000519767 PHLDB2Q86SQ0 1253 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 PHF13Q86YI8 300 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-220ENST00000519767 GATAD2AQ86YP4 633 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 PLPP6Q8IY26 295 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 PCDHB18PQ96TA0 734 aa25.86■■□□□ 1.73
VEGFA-220ENST00000519767 LDOC1O95751 146 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-220ENST00000519767 C1SP09871 688 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 CCDC172P0C7W6 258 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 GLDCP23378 1020 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 MAPKAPK2P49137 400 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 GEMIN4P57678 1058 aaKnown RBP25.85■■□□□ 1.73
VEGFA-220ENST00000519767 PTP4A2Q12974 167 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 CLEC16AQ2KHT3 1053 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 C15orf59Q2T9L4 293 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-220ENST00000519767 CARD16Q5EG05 197 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 RWDD4Q6NW29 188 aaKnown RBP25.85■■□□□ 1.73
VEGFA-220ENST00000519767 DPY19L3Q6ZPD9 716 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 HORMAD1Q86X24 394 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 DRC7Q8IY82 874 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 CHST14Q8NCH0 376 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 ISG20Q96AZ6 181 aaKnown RBP25.85■■□□□ 1.73
VEGFA-220ENST00000519767 KLHDC7BQ96G42 594 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 HEPHQ9BQS7 1158 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 TNKS2Q9H2K2 1166 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 PCDHGA1Q9Y5H4 931 aa25.85■■□□□ 1.73
VEGFA-220ENST00000519767 ZNF821O75541 412 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-220ENST00000519767 MBD3O95983 291 aa25.84■■□□□ 1.73
VEGFA-220ENST00000519767 PLEKP08567 350 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-220ENST00000519767 EPHA8P29322 1005 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-220ENST00000519767 RFC1P35251 1148 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-220ENST00000519767 MANEALQ5VSG8 457 aa25.84■■□□□ 1.73
VEGFA-220ENST00000519767 SPATS2Q86XZ4 545 aaKnown RBP25.84■■□□□ 1.73
VEGFA-220ENST00000519767 JOSD2Q8TAC2 188 aa25.84■■□□□ 1.73
VEGFA-220ENST00000519767 ARRDC3Q96B67 414 aa25.84■■□□□ 1.73
VEGFA-220ENST00000519767 SELENOOQ9BVL4 669 aa25.84■■□□□ 1.73
VEGFA-220ENST00000519767 MAGEH1Q9H213 219 aa25.84■■□□□ 1.73
VEGFA-220ENST00000519767 CCDC86Q9H6F5 360 aaKnown RBP25.84■■□□□ 1.73
VEGFA-220ENST00000519767 HPCAL4Q9UM19 191 aa25.84■■□□□ 1.73
VEGFA-220ENST00000519767 A0A1W2PQU0 124 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 SIGLEC16A6NMB1 481 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 LEFTY1O75610 366 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 DNA2P51530 1060 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 SMAD1Q15797 465 aaKnown RBP25.83■■□□□ 1.73
VEGFA-220ENST00000519767 PROSER1Q86XN7 944 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 C3orf20Q8ND61 904 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 FAM174AQ8TBP5 190 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 FAM172AQ8WUF8 416 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 NTAN1Q96AB6 310 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 AGPAT1Q99943 283 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 TMEM248Q9NWD8 314 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 WASF2Q9Y6W5 498 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 SPEGQ15772 3267 aa25.83■■□□□ 1.73
VEGFA-220ENST00000519767 PLXNA2O75051 1894 aa25.83■■□□□ 1.72
VEGFA-220ENST00000519767 ANKRD62A6NC57 917 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 ENC1O14682 589 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 SLC31A1O15431 190 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 PCDH8O95206 1070 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 GPD1P21695 349 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 HDAC4P56524 1084 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 ARF5P84085 180 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 C1QBPQ07021 282 aaKnown RBP25.82■■□□□ 1.72
VEGFA-220ENST00000519767 ZNF284Q2VY69 593 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 RAB6CQ53S08 254 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 CCDC183Q5T5S1 534 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 WDR59Q6PJI9 974 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 NLRP14Q86W24 1093 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 EID2Q8N6I1 236 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 TMEM145Q8NBT3 493 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 GRIN3AQ8TCU5 1115 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 TBC1D31Q96DN5 1066 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 FEM1CQ96JP0 617 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 CNDP2Q96KP4 475 aaKnown RBP25.82■■□□□ 1.72
VEGFA-220ENST00000519767 NAT10Q9H0A0 1025 aaKnown RBP25.82■■□□□ 1.72
VEGFA-220ENST00000519767 RAB6CQ9H0N0 254 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 ZFYVE26Q68DK2 2539 aa25.82■■□□□ 1.72
VEGFA-220ENST00000519767 LRIG2O94898 1065 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 ITGB7P26010 798 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 AKT2P31751 481 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms