RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 HDAC8Q9BY41 377 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 SLC6A17Q9H1V8 727 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 MTG2Q9H4K7 406 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 GMEB2Q9UKD1 530 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 PILRBQ9UKJ0 227 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 HPCAL4Q9UM19 191 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 WASF2Q9Y6W5 498 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 CACNA1EQ15878 2313 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 NYNRINQ9P2P1 1898 aaKnown RBP11.74□□□□□ -0.53
SPIDR-212ENST00000519661 DMXL1Q9Y485 3027 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 CACNA1AO00555 2505 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 TSPAN11A1L157 253 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 ARHGAP42A6NI28 874 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 LATO43561 262 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 PSTPIP1O43586 416 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 BUB1BO60566 1050 aaPredicted RBP11.74□□□□□ -0.53
SPIDR-212ENST00000519661 DNTTP04053 509 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 PRNPP04156 253 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 CTSLP07711 333 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 SERPINB6P35237 376 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 LIMK1P53667 647 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 IL10RBQ08334 325 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 NSUN2Q08J23 767 aaKnown RBP eCLIP11.74□□□□□ -0.53
SPIDR-212ENST00000519661 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 CARD16Q5EG05 197 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 PPP6R3Q5H9R7 873 aaPredicted RBP11.74□□□□□ -0.53
SPIDR-212ENST00000519661 AGBL4Q5VU57 503 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 SLC9A4Q6AI14 798 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 IL31Q6EBC2 164 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 ALG1LQ6GMV1 187 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 NEK5Q6P3R8 708 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 DPY19L3Q6ZPD9 716 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 CPNE8Q86YQ8 564 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 SYT12Q8IV01 421 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 SLC41A1Q8IVJ1 513 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 STK40Q8N2I9 435 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 LRRC57Q8N9N7 239 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 CCDC112Q8NEF3 446 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 OR2AP1Q8NGE2 309 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 PCDH19Q8TAB3 1148 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 TSGA13Q96PP4 275 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 PSKH2Q96QS6 385 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 CPEB1Q9BZB8 566 aaKnown RBP11.74□□□□□ -0.53
SPIDR-212ENST00000519661 SLC39A8Q9C0K1 460 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 CD93Q9NPY3 652 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 VPS45Q9NRW7 570 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 SALL4Q9UJQ4 1053 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 SARDHQ9UL12 918 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 CYP8B1Q9UNU6 501 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 ABCA7Q8IZY2 2146 aa11.74□□□□□ -0.53
SPIDR-212ENST00000519661 C1QTNF3-AMACRE9PGA6 284 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 MID1O15344 667 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 PLRG1O43660 514 aaKnown RBP11.73□□□□□ -0.53
SPIDR-212ENST00000519661 AP1G1O43747 822 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 MAFKO60675 156 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 TMCC1O94876 653 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 IPO7O95373 1038 aaKnown RBP11.73□□□□□ -0.53
SPIDR-212ENST00000519661 CD48P09326 243 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 ACADMP11310 421 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 KDELR1P24390 212 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 ITGB7P26010 798 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 CHRNA3P32297 505 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 SLC8A1P32418 973 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 NUDT1P36639 197 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 MPLP40238 635 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 PTGER3P43115 390 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 CCR5P51681 352 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 CDH6P55285 790 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 GALNT2Q10471 571 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 GRM3Q14832 879 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 RALGPS1Q5JS13 557 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 PIP5KL1Q5T9C9 394 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 LYSMD4Q5XG99 296 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 SLC23A3Q6PIS1 610 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 TMCO3Q6UWJ1 677 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 KIAA1324Q6UXG2 1013 aaKnown RBP11.73□□□□□ -0.53
SPIDR-212ENST00000519661 LINGO4Q6UY18 593 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 PRR23BQ6ZRT6 265 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 ALYREFQ86V81 257 aaKnown RBP11.73□□□□□ -0.53
SPIDR-212ENST00000519661 MMAAQ8IVH4 418 aaKnown RBP11.73□□□□□ -0.53
SPIDR-212ENST00000519661 RHOT1Q8IXI2 618 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 KATNAL2Q8IYT4 538 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 PGBD3Q8N328 593 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 TXLNBQ8N3L3 684 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 TEX26Q8N6G2 289 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 PQLC3Q8N755 202 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 HEPHQ9BQS7 1158 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 SPON2Q9BUD6 331 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 OSBPL1AQ9BXW6 950 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 LACRTQ9GZZ8 138 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 BTBD1Q9H0C5 482 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 CAPN10Q9HC96 672 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 PARD6AQ9NPB6 346 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 SEMA4GQ9NTN9 838 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 ETNK2Q9NVF9 386 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 DDX56Q9NY93 547 aaKnown RBP11.73□□□□□ -0.53
SPIDR-212ENST00000519661 NCDNQ9UBB6 729 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 DKK3Q9UBP4 350 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms