RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 DZANK1Q9NVP4 752 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 AAR2Q9Y312 384 aaKnown RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 MRPS23Q9Y3D9 190 aaKnown RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 C2orf16Q68DN1 1984 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 A0A0D9SEW6 157 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 EXOC1LA0A1B0GW35 172 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 TLDC2A0PJX2 215 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 HMGB1P1B2RPK0 211 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 RFXAPO00287 272 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 RRP9O43818 475 aaKnown RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 LUC7L3O95232 432 aaKnown RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 CEBPBP17676 345 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 IGFBP4P22692 258 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 SSTR1P30872 391 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 GEMP55040 296 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 GPX6P59796 221 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 SLC10A7Q0GE19 358 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 CDH18Q13634 790 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 SPARCL1Q14515 664 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 ZNF235Q14590 738 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 LONRF1Q17RB8 773 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 MPPE1Q53F39 396 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 AGBL2Q5U5Z8 902 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 RNF219Q5W0B1 726 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 KCTD11Q693B1 232 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 NAPEPLDQ6IQ20 393 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 CXorf57Q6NSI4 855 aaKnown RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 CCDC117Q8IWD4 279 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 KLHDC8BQ8IXV7 354 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 AGGF1Q8N302 714 aaeCLIP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 BBS5Q8N3I7 341 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 TEX26Q8N6G2 289 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 OR52K2Q8NGK3 314 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 ING5Q8WYH8 240 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 USP13Q92995 863 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 MRPL38Q96DV4 380 aaKnown RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 CFAP36Q96G28 342 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 OXNAD1Q96HP4 312 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 MUC3BQ9H195 1237 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 PDFQ9HBH1 243 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 ATP13A1Q9HD20 1204 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 HAUS2Q9NVX0 235 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 UBP1Q9NZI7 540 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 VPS18Q9P253 973 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 BCCIPQ9P287 314 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 ZC3H7BQ9UGR2 993 aaKnown RBP12.61□□□□□ -0.39
SPIDR-209ENST00000519141 CCL26Q9Y258 94 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 MAD1L1Q9Y6D9 718 aa12.61□□□□□ -0.39
SPIDR-209ENST00000519141 MIA3Q5JRA6 1907 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 KDELR3O43731 214 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 TCEA3O75764 348 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 SLCO1A2P46721 670 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 SESN2P58004 480 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-209ENST00000519141 TNK2Q07912 1038 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 ITKQ08881 620 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 LBRQ14739 615 aaKnown RBP12.6□□□□□ -0.39
SPIDR-209ENST00000519141 KCTD16Q68DU8 428 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 TMC5Q6UXY8 1006 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 C3orf62Q6ZUJ4 267 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 LINC00523Q86TU6 105 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 IGDCC3Q8IVU1 814 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 C12orf76Q8N812 135 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-209ENST00000519141 OR52K1Q8NGK4 314 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 SPATA22Q8NHS9 363 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 DDI1Q8WTU0 396 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 STAMBPL1Q96FJ0 436 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 PGM2Q96G03 612 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 SIGLEC10Q96LC7 697 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 EBNA1BP2Q99848 306 aaKnown RBP12.6□□□□□ -0.39
SPIDR-209ENST00000519141 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-209ENST00000519141 SLC25A51Q9H1U9 297 aa12.6□□□□□ -0.39
SPIDR-209ENST00000519141 SDR42E2A6NKP2 422 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 AP3B1O00203 1094 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 RGS16O15492 202 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-209ENST00000519141 USP12O75317 370 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 PRAMEF12O95522 483 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 CYBBP04839 570 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 GSTA2P09210 222 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 POU3F3P20264 500 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-209ENST00000519141 MGAT1P26572 445 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 CBX1P83916 185 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 USP4Q13107 963 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 MPP7Q5T2T1 576 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 CASC4Q6P4E1 433 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 LEKR1Q6ZMV7 388 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 MFN1Q8IWA4 741 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 DNAAF3Q8N9W5 541 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 IPMKQ8NFU5 416 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 VN1R2Q8NFZ6 395 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 PPM1EQ8WY54 764 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 BHMTQ93088 406 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 TBL1YQ9BQ87 522 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 ACE2Q9BYF1 805 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-209ENST00000519141 PPCSQ9HAB8 311 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 CASS4Q9NQ75 786 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 PIH1D1Q9NWS0 290 aaKnown RBP12.59□□□□□ -0.39
SPIDR-209ENST00000519141 BFARQ9NZS9 450 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 SAMD15Q9P1V8 674 aa12.59□□□□□ -0.39
SPIDR-209ENST00000519141 UBA2Q9UBT2 640 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 772.1 ms