RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 RBM14Q96PK6 669 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 GSTO2Q9H4Y5 243 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 USP40Q9NVE5 1235 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 MCM9Q9NXL9 1143 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 RIMKLBQ9ULI2 386 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 NEDD4P46934 1319 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 UBE2CO00762 179 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 VILLO15195 856 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 DIAPH2O60879 1101 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 ENTPD3O75355 529 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 SLC4A1P02730 911 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 C6P13671 934 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 CSF2RBP32927 897 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 MRPL12P52815 198 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 CLNS1AP54105 237 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 LILRA4P59901 499 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 VAMP2P63027 116 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 TOB2Q14106 344 aaPredicted RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 P3H1Q32P28 736 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 LRRC31Q6UY01 552 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 CCDC170Q8IYT3 715 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 GPC2Q8N158 579 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 FRMD1Q8N878 549 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 PDPRQ8NCN5 879 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 INTS4Q96HW7 963 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 IMPG2Q9BZV3 1241 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 LRRC72A6NJI9 287 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 LSM1O15116 133 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 DHHO43323 396 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 NMT2O60551 498 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 SRGAP2O75044 1071 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 PHF2O75151 1096 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 C8BP07358 591 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 CD8BP10966 210 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 HSPA8P11142 646 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 LYL1P12980 280 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 EIF2DP41214 584 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 AP1B1Q10567 949 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 ARHGEF7Q14155 803 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 FAM214AQ32MH5 1076 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 TAOK1Q7L7X3 1001 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 MIB1Q86YT6 1006 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 TRIML2Q8N7C3 387 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 USP38Q8NB14 1042 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 RASSF8Q8NHQ8 419 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 IRF7Q92985 503 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 CFAP36Q96G28 342 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 CALML4Q96GE6 196 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 RBM18Q96H35 190 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 PRMT6Q96LA8 375 aaPredicted RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 NDC1Q9BTX1 674 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 NCDNQ9UBB6 729 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 ZDHHC8Q9ULC8 765 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 ZNF510Q9Y2H8 683 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 CLEC3BP05452 202 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 PAFAH1B1P43034 410 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 ADGRF1Q5T601 910 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 ATPAF1Q5TC12 328 aaPredicted RBP7.53□□□□□ -1.2
CLK4-202ENST00000519132 THOC7Q6I9Y2 204 aaKnown RBP7.53□□□□□ -1.2
CLK4-202ENST00000519132 BTN2A1Q7KYR7 527 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 ZNF572Q7Z3I7 529 aaPredicted RBP7.53□□□□□ -1.2
CLK4-202ENST00000519132 NLRX1Q86UT6 975 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 MAPKAPK5Q8IW41 473 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 FAM126BQ8IXS8 530 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 ESR2Q92731 530 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 CYFIP2Q96F07 1278 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 RABEP2Q9H5N1 569 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 DECR2Q9NUI1 292 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 RAXQ9Y2V3 346 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 SCN4AP35499 1836 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 KCNJ13O60928 360 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 MAFO75444 373 aaPredicted RBP7.53□□□□□ -1.2
CLK4-202ENST00000519132 VNN1O95497 513 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 VIPP01282 170 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 CNPP09543 421 aaKnown RBP7.53□□□□□ -1.2
CLK4-202ENST00000519132 ZFXP17010 805 aaPredicted RBP7.53□□□□□ -1.2
CLK4-202ENST00000519132 CYP27A1Q02318 531 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 SMC1AQ14683 1233 aaKnown RBP7.53□□□□□ -1.2
CLK4-202ENST00000519132 INAQ16352 499 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 PLEKHN1Q494U1 663 aaPredicted RBP7.53□□□□□ -1.2
CLK4-202ENST00000519132 RNF43Q68DV7 783 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 Q6ZUG5 572 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 DGLUCYQ7Z3D6 616 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 KIAA1328Q86T90 577 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 FAM71DQ8N9W8 422 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 VPS33AQ96AX1 596 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 LRIG1Q96JA1 1093 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 FAM84AQ96KN4 292 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 KLHL32Q96NJ5 620 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 SLC46A1Q96NT5 459 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 UQCC2Q9BRT2 126 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 KLHL4Q9C0H6 718 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 TCP11L1Q9NUJ3 509 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 SAE1Q9UBE0 346 aaPredicted RBP7.53□□□□□ -1.2
CLK4-202ENST00000519132 ZNF541Q9H0D2 1346 aa7.53□□□□□ -1.2
CLK4-202ENST00000519132 BIN1O00499 593 aa7.52□□□□□ -1.21
CLK4-202ENST00000519132 TTI1O43156 1089 aa7.52□□□□□ -1.21
CLK4-202ENST00000519132 CTIFO43310 598 aaKnown RBP7.52□□□□□ -1.21
CLK4-202ENST00000519132 PIAS2O75928 621 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms