RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	TPM1	P09493	284 aa		24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885	DRD3	P35462	400 aa		24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885	ZNF135	P52742	658 aa	Predicted RBP	24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885	C21orf59	P57076	290 aa		24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885	YBEY	P58557	167 aa	Predicted RBP	24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885	ACAP1	Q15027	740 aa		24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885	ARTN	Q5T4W7	220 aa		24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885	PSTK	Q8IV42	348 aa	Known RBP	24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885	CASKIN2	Q8WXE0	1202 aa		24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885	FAM131C	Q96AQ9	280 aa		24.68	■■□□□ 1.54
CNOT7-204	ENST00000518885		K7ERQ8	282 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	ATMIN	O43313	823 aa	Predicted RBP	24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	SMAD6	O43541	496 aa	Known RBP	24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	PLRG1	O43660	514 aa	Known RBP	24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	DFNA5	O60443	496 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	ZNF883	P0CG24	379 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	DNA2	P51530	1060 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	TPI1	P60174	286 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	PARP15	Q460N3	678 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	PRPF39	Q86UA1	669 aa	Known RBP	24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	PLPP6	Q8IY26	295 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	GAREM1	Q9H706	876 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	PREB	Q9HCU5	417 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	SARDH	Q9UL12	918 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	AP4E1	Q9UPM8	1137 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	DOCK4	Q8N1I0	1966 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	PCDH15	Q96QU1	1955 aa		24.67	■■□□□ 1.54
CNOT7-204	ENST00000518885	GLDC	P23378	1020 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	PI4KA	P42356	2102 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	CSNK1E	P49674	416 aa	Known RBP	24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	ARF5	P84085	180 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	CNTN1	Q12860	1018 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	SUZ12	Q15022	739 aa	Known RBP	24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	TSR1	Q2NL82	804 aa	Known RBP	24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	CARD16	Q5EG05	197 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	ERMARD	Q5T6L9	678 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	NEK5	Q6P3R8	708 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	XPO4	Q9C0E2	1151 aa	Known RBP	24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	TNKS2	Q9H2K2	1166 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	MYO1A	Q9UBC5	1043 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	NEU3	Q9UQ49	428 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	DMTF1	Q9Y222	760 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885	GON4L	Q3T8J9	2241 aa		24.66	■■□□□ 1.54
CNOT7-204	ENST00000518885		A0A1B0GVT2	93 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	WASH4P	A8MWX3	477 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	DAPK3	O43293	454 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	KDELR3	O43731	214 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	ACVRL1	P37023	503 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	OGDH	Q02218	1023 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	NFKBIB	Q15653	356 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	HGSNAT	Q68CP4	663 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	PYROXD2	Q8N2H3	581 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	DEFB124	Q8NES8	71 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	LRIG1	Q96JA1	1093 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	HEPH	Q9BQS7	1158 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	DHX35	Q9H5Z1	703 aa	Known RBP	24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	AASDHPPT	Q9NRN7	309 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	NDFIP2	Q9NV92	336 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	ZNHIT6	Q9NWK9	470 aa	Known RBP	24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	ANKRD6	Q9Y2G4	727 aa		24.65	■■□□□ 1.54
CNOT7-204	ENST00000518885	VILL	O15195	856 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	GYPC	P04921	128 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	SNRPD1	P62314	119 aa	Known RBP	24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	ZNF252P-AS1	Q0IIN9	211 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	HLA-B	Q31612	363 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	SETMAR	Q53H47	684 aa	Predicted RBP	24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	AGBL4	Q5VU57	503 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	SPECC1L	Q69YQ0	1117 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	DPY19L3	Q6ZPD9	716 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	PIP4P1	Q86T03	277 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	TRIM69	Q86WT6	500 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	GRIN3A	Q8TCU5	1115 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	SERAC1	Q96JX3	654 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	HDAC8	Q9BY41	377 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	PCDHB9	Q9Y5E1	797 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	PCDHGB2	Q9Y5G2	931 aa		24.64	■■□□□ 1.54
CNOT7-204	ENST00000518885	EEF2K	O00418	725 aa	Known RBP	24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	LAT	O43561	262 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	BUB1	O43683	1085 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	MAGEC1	O60732	1142 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	GJB3	O75712	270 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	CASP14	P31944	242 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	PCK1	P35558	622 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	RAD51	Q06609	339 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	POM121L1P	Q3SYA9	428 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	ARSI	Q5FYB1	569 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	ERN2	Q76MJ5	926 aa	Known RBP	24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	UMODL1-AS1	Q8N2C9	162 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	RYBP	Q8N488	228 aa	Predicted RBP	24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	HECA	Q9UBI9	543 aa	Predicted RBP	24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	PCSK1N	Q9UHG2	260 aa		24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	FCF1	Q9Y324	198 aa	Known RBP	24.63	■■□□□ 1.53
CNOT7-204	ENST00000518885	LEFTY1	O75610	366 aa		24.62	■■□□□ 1.53
CNOT7-204	ENST00000518885	GSR	P00390	522 aa		24.62	■■□□□ 1.53
CNOT7-204	ENST00000518885	CTSL	P07711	333 aa		24.62	■■□□□ 1.53
CNOT7-204	ENST00000518885	CD38	P28907	300 aa		24.62	■■□□□ 1.53
CNOT7-204	ENST00000518885	CCNH	P51946	323 aa	Predicted RBP	24.62	■■□□□ 1.53
CNOT7-204	ENST00000518885	NEK3	P51956	506 aa		24.62	■■□□□ 1.53
CNOT7-204	ENST00000518885	NDST2	P52849	883 aa		24.62	■■□□□ 1.53

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms