RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 FNDC1Q4ZHG4 1894 aaPredicted RBP16.83■□□□□ 0.28
PCDHGA11-202ENST00000518882 TMEM233B4DJY2 109 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 TARM1B6A8C7 271 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 SLC5A9Q2M3M2 681 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 RARS2Q5T160 578 aaKnown RBP16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 NOTUMQ6P988 496 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 PGAM4Q8N0Y7 254 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 SPATA6LQ8N4H0 392 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 FAM156AQ8NDB6 213 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 STYXQ8WUJ0 223 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 SCYL1Q96KG9 808 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 TNIP3Q96KP6 325 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 UNKQ9C0B0 810 aaKnown RBP16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 LRRC4Q9HBW1 653 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 ZBTB26Q9HCK0 441 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 TLK1Q9UKI8 766 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 RUVBL2Q9Y230 463 aaKnown RBP16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 LZTS1Q9Y250 596 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 YJEFN3A6XGL0 299 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 CXCL11O14625 94 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 CABYRO75952 493 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 NPY2RP49146 381 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 TAF6P49848 677 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 TKTL1P51854 596 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 MAP3K7CLP57077 242 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 CDKL1Q00532 357 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 MYBPC1Q00872 1141 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 PRKAA1Q13131 559 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 TTLL12Q14166 644 aaPredicted RBP16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 USP10Q14694 798 aaKnown RBP16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 SLC41A1Q8IVJ1 513 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 SIX6OS1Q8N1H7 587 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 RDH11Q8TC12 318 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 ZNF560Q96MR9 790 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 APPL1Q9UKG1 709 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 CDYLQ9Y232 598 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 COPG1Q9Y678 874 aaKnown RBP16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 PLXNB2O15031 1838 aa16.82■□□□□ 0.28
PCDHGA11-202ENST00000518882 PRSS51A0A1B0GVH4 220 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 ERI2A8K979 691 aaKnown RBP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 DLX3O60479 287 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 CLPTM1O96005 669 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 CD4P01730 458 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 AHSGP02765 367 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 APOA4P06727 396 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 C6orf52Q5T4I8 152 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 TSTD2Q5T7W7 516 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 KIAA0319Q5VV43 1072 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 PAOXQ6QHF9 649 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 RBM44Q6ZP01 1051 aaKnown RBP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 SPNS2Q8IVW8 549 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 MFSD6LQ8IWD5 586 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 ZSCAN18Q8TBC5 510 aaPredicted RBP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 EMID1Q96A84 441 aaPredicted RBP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 HDAC11Q96DB2 347 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 NPAS2Q99743 824 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 ULBP1Q9BZM6 244 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 RHOJQ9H4E5 214 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 SUDS3Q9H7L9 328 aaPredicted RBP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 MID2Q9UJV3 735 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 RAB26Q9ULW5 256 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 GNEQ9Y223 722 aaKnown RBP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 MAGEB16A2A368 324 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 TCAF2A6NFQ2 919 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 ACOT8O14734 319 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 HUS1O60921 280 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 SRGAP2BP0DMP2 458 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 TCN1P20061 433 aaPredicted RBP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 RPL5P46777 297 aaKnown RBP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 LILRA4P59901 499 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 NADK2Q4G0N4 442 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 ZFP1Q6P2D0 407 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 OTOP3Q7RTS5 596 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 GPRIN1Q7Z2K8 1008 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 ARHGAP22Q7Z5H3 698 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 CEP97Q8IW35 865 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 GALNT4Q8N4A0 578 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 KCTD13Q8WZ19 329 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 DGCR14Q96DF8 476 aaKnown RBP16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 MPP4Q96JB8 637 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 OMDQ99983 421 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 KATNBL1Q9H079 304 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 XPR1Q9UBH6 696 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 ANKRD6Q9Y2G4 727 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 AK5Q9Y6K8 562 aa16.81■□□□□ 0.28
PCDHGA11-202ENST00000518882 NRCAMQ92823 1304 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 TRIP12Q14669 1992 aaPredicted RBP16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 SLC22A2O15244 555 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 BCAS2O75934 225 aaPredicted RBP16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 DDHD2O94830 711 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 PGK1P00558 417 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 JCHAINP01591 159 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 ARSAP15289 507 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 ATP6V1B1P15313 513 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 PTPN1P18031 435 aaKnown RBP16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 ME2P23368 584 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 GALNT2Q10471 571 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms