RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TMEM174Q8WUU8 243 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 SMG7Q92540 1137 aaKnown RBP3.97□□□□□ -1.77
VPS13B-207ENST00000518569 ZNF333Q96JL9 665 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 ZNF778Q96MU6 729 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 FUZQ9BT04 418 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 AAMDCQ9H7C9 122 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 WDR26Q9H7D7 661 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 ATP8A2Q9NTI2 1148 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 PPP1R14DQ9NXH3 145 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 ELOVL5Q9NYP7 299 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 HCN3Q9P1Z3 774 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 CRYL1Q9Y2S2 319 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 TMEM98Q9Y2Y6 226 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 C17orf113A0A1B0GUU1 675 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.96□□□□□ -1.78
VPS13B-207ENST00000518569 A6NNC1 897 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 TEX22C9J3V5 150 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 FGF2P09038 288 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 UNGP13051 313 aaPredicted RBP3.96□□□□□ -1.78
VPS13B-207ENST00000518569 RASSF2P50749 326 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 BLKP51451 505 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 GAD2Q05329 585 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 CAMK1Q14012 370 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 SYTL3Q4VX76 610 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 Q5PR19 223 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 TBC1D9BQ66K14 1250 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 NCAPH2Q6IBW4 605 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 CCDC70Q6NSX1 233 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 ADGRG6Q86SQ4 1221 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 TMC8Q8IU68 726 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 CAMK1DQ8IU85 385 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 NAXEQ8NCW5 288 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 ZMIZ2Q8NF64 920 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 TMEM170AQ8WVE7 144 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 HSPH1Q92598 858 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 CNOT9Q92600 299 aaKnown RBP3.96□□□□□ -1.78
VPS13B-207ENST00000518569 HMCESQ96FZ2 354 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 ZNF419Q96HQ0 510 aaPredicted RBP3.96□□□□□ -1.78
VPS13B-207ENST00000518569 PPM1MQ96MI6 270 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.96□□□□□ -1.78
VPS13B-207ENST00000518569 INTS2Q9H0H0 1204 aaKnown RBP3.96□□□□□ -1.78
VPS13B-207ENST00000518569 LMAN2LQ9H0V9 348 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 MROH8Q9H579 483 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 EPHX3Q9H6B9 360 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 MAP6D1Q9H9H5 199 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 JMJD4Q9H9V9 463 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 ENTPD7Q9NQZ7 604 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 POT1Q9NUX5 634 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 BEX4Q9NWD9 120 aaPredicted RBP3.96□□□□□ -1.78
VPS13B-207ENST00000518569 IFT80Q9P2H3 777 aaPredicted RBP3.96□□□□□ -1.78
VPS13B-207ENST00000518569 ZNF69Q9UC07 566 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 HSF4Q9ULV5 492 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 COG5Q9UP83 839 aa3.96□□□□□ -1.78
VPS13B-207ENST00000518569 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 IGLV5-39A0A0G2JS06 123 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 A0A1W2PPC1 479 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 TARSL2A2RTX5 802 aaKnown RBP3.95□□□□□ -1.78
VPS13B-207ENST00000518569 FAM157AC9JC47 383 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 NDUFB8O95169 186 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 CBX6O95503 412 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 AGR2O95994 175 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 ADAP00813 363 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 IL1AP01583 271 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 HNRNPA1P09651 372 aaKnown RBP eCLIP3.95□□□□□ -1.78
VPS13B-207ENST00000518569 YWHAQP27348 245 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 TNFSF8P32971 234 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 TBX2Q13207 712 aaPredicted RBP3.95□□□□□ -1.78
VPS13B-207ENST00000518569 NAA25Q14CX7 972 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 NFIL3Q16649 462 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 ZNF766Q5HY98 468 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 HMBOX1Q6NT76 420 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 IL20RBQ6UXL0 311 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 SERPINA11Q86U17 422 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 PIM3Q86V86 326 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 GHDCQ8N2G8 530 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 CPXM2Q8N436 756 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 ZNF548Q8NEK5 533 aaPredicted RBP3.95□□□□□ -1.78
VPS13B-207ENST00000518569 CMASQ8NFW8 434 aaPredicted RBP3.95□□□□□ -1.78
VPS13B-207ENST00000518569 ELP4Q96EB1 424 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 VCPIP1Q96JH7 1222 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 B3GNT4Q9C0J1 378 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 UBN1Q9NPG3 1134 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 TBC1D14Q9P2M4 693 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 NLKQ9UBE8 527 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 SEL1LQ9UBV2 794 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 SLC25A10Q9UBX3 287 aaPredicted RBP3.95□□□□□ -1.78
VPS13B-207ENST00000518569 ANAPC4Q9UJX5 808 aa3.95□□□□□ -1.78
VPS13B-207ENST00000518569 TMEM272A0A1B0GTI8 110 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 PER2O15055 1255 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 ENO3P13929 434 aaPredicted RBP3.94□□□□□ -1.78
VPS13B-207ENST00000518569 TNFRSF1BP20333 461 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 DPP6P42658 865 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 PTPN9P43378 593 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 GPR12P47775 334 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 TUBP50607 506 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 CDH15P55291 814 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 GPR68Q15743 365 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 JAKMIP3Q5VZ66 844 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 PARM1Q6UWI2 310 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 C17orf99Q6UX52 265 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms