RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 ZDHHC5Q9C0B5 715 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 ASXL3Q9C0F0 2248 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 CYP3A43Q9HB55 503 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 TMEM30AQ9NV96 361 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 KLHL11Q9NVR0 708 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 TBC1D14Q9P2M4 693 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 DEC1Q9P2X7 70 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 FAM153AQ9UHL3 310 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 CNTN6Q9UQ52 1028 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 PLAAQ9Y263 795 aa7.65□□□□□ -1.18
PVT1-206ENST00000517838 FAM149AA5PLN7 773 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 WASH3PC4AMC7 463 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 F8VP50 259 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 HOXC11O43248 304 aaPredicted RBP7.64□□□□□ -1.19
PVT1-206ENST00000517838 LILRA1O75019 489 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 NDUFS2O75306 463 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 PDGFRBP09619 1106 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 MBL2P11226 248 aaPredicted RBP7.64□□□□□ -1.19
PVT1-206ENST00000517838 GNSP15586 552 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 PSMA2P25787 234 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 COILP38432 576 aaPredicted RBP7.64□□□□□ -1.19
PVT1-206ENST00000517838 HSPA9P38646 679 aaKnown RBP7.64□□□□□ -1.19
PVT1-206ENST00000517838 CDH8P55286 799 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 BNC1Q01954 994 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 CBLBQ13191 982 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 MAMLD1Q13495 774 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 SKIDA1Q1XH10 827 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 WDR45BQ5MNZ6 344 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 CEP85LQ5SZL2 805 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 SYCP2LQ5T4T6 812 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 BTBD8Q5XKL5 378 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 KAZNQ674X7 775 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 PLEKHA7Q6IQ23 1121 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 GSTA5Q7RTV2 222 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 CCDC25Q86WR0 208 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 BBS7Q8IWZ6 715 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 CHPFQ8IZ52 775 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 MREGQ8N565 214 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 UBR7Q8N806 425 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 PRELID2Q8N945 189 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 TERB1Q8NA31 727 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 C1orf54Q8WWF1 131 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 OTUB2Q96DC9 234 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 PCED1BQ96HM7 432 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 C8orf48Q96LL4 319 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 ZIM3Q96PE6 472 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 SYT15Q9BQS2 421 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 ERP44Q9BS26 406 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 UBXN6Q9BZV1 441 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 ZNF518BQ9C0D4 1074 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 MIS12Q9H081 205 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 GAREM1Q9H706 876 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 PRDM16Q9HAZ2 1276 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 SPHK2Q9NRA0 654 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 TMPRSS4Q9NRS4 437 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 SUSD2Q9UGT4 822 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 CDH9Q9ULB4 789 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 FNDC3AQ9Y2H6 1198 aaKnown RBP7.64□□□□□ -1.19
PVT1-206ENST00000517838 SNX24Q9Y343 169 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 NUP205Q92621 2012 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 THADAQ6YHU6 1953 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 PCDH15Q96QU1 1955 aa7.64□□□□□ -1.19
PVT1-206ENST00000517838 ZNF462Q96JM2 2506 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 A0A1B0GTW7 788 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 LRRD1A4D1F6 860 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 PRRT4C9JH25 899 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 COCHO43405 550 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 GREM1O60565 184 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 CILPO75339 1184 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 MYZAPP0CAP1 466 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 ZNF883P0CG24 379 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 RARAP10276 462 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 RALAP11233 206 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 VDRP11473 427 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 PLA2G2AP14555 144 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 MMP8P22894 467 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 ITPKBP27987 946 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 CD6P30203 668 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 VPS41P49754 854 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 PEX5P50542 639 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 RAD23BP54727 409 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 PLTPP55058 493 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 RAB15P59190 212 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 PIGHQ14442 188 aaPredicted RBP7.63□□□□□ -1.19
PVT1-206ENST00000517838 MAPRE1Q15691 268 aaKnown RBP7.63□□□□□ -1.19
PVT1-206ENST00000517838 SMAD1Q15797 465 aaKnown RBP7.63□□□□□ -1.19
PVT1-206ENST00000517838 HADHQ16836 314 aaKnown RBP7.63□□□□□ -1.19
PVT1-206ENST00000517838 GOLGA7BQ2TAP0 167 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 HLA-BQ31612 363 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 ANO4Q32M45 955 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 PREPLQ4J6C6 727 aaPredicted RBP7.63□□□□□ -1.19
PVT1-206ENST00000517838 DNAJC21Q5F1R6 531 aaKnown RBP7.63□□□□□ -1.19
PVT1-206ENST00000517838 FAM102AQ5T9C2 384 aaPredicted RBP7.63□□□□□ -1.19
PVT1-206ENST00000517838 DENND2CQ68D51 928 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 SDE2Q6IQ49 451 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 LRIG3Q6UXM1 1119 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 SYDE1Q6ZW31 735 aaPredicted RBP7.63□□□□□ -1.19
PVT1-206ENST00000517838 HOOK3Q86VS8 718 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 KATNAL2Q8IYT4 538 aa7.63□□□□□ -1.19
PVT1-206ENST00000517838 C3orf20Q8ND61 904 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms