RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ZNF513Q8N8E2 541 aaPredicted RBP10.07□□□□□ -0.8
CLN8-202ENST00000517514 KDM1BQ8NB78 822 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 TXNDC5Q8NBS9 432 aaKnown RBP10.07□□□□□ -0.8
CLN8-202ENST00000517514 RPLP0P6Q8NHW5 317 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 PTPRN2Q92932 1015 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 NKD2Q969F2 451 aaPredicted RBP10.07□□□□□ -0.8
CLN8-202ENST00000517514 CAPZA3Q96KX2 299 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 NELL2Q99435 816 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 IL12RB2Q99665 862 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 GABRG3Q99928 467 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 AP1M1Q9BXS5 423 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 CHRDQ9H2X0 955 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 STON1Q9Y6Q2 735 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 TTC24A2A3L6 582 aaPredicted RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 BCLAF3A2AJT9 711 aaKnown RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 HACD1B0YJ81 288 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 TNFRSF10AO00220 468 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 PGRMC1O00264 195 aaKnown RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 NCAM2O15394 837 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 ATP5BP06576 529 aaKnown RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 C7P10643 843 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 AOC1P19801 751 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 CR2P20023 1033 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 MX2P20592 715 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 PTPN3P26045 913 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 CD68P34810 354 aaPredicted RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 RPS9P46781 194 aaKnown RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 KCNJ1P48048 391 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 GDF10P55107 478 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 IFI35P80217 286 aaPredicted RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 ZNF33AQ06730 810 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 SLC20A2Q08357 652 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 SNX1Q13596 522 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 LBRQ14739 615 aaKnown RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 CCNG2Q16589 344 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 HNRNPA1L2Q32P51 320 aaKnown RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 INO80DQ53TQ3 878 aaPredicted RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 C9orf64Q5T6V5 341 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 RETSATQ6NUM9 610 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 C22orf39Q6P5X5 142 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 DRICH1Q6PGQ1 229 aaPredicted RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 Q6ZVU0 165 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 BMP8AQ7Z5Y6 402 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 CCDC13Q8IYE1 715 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 SYNPOQ8N3V7 929 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 TMEM105Q8N8V8 129 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 GLIS1Q8NBF1 620 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 TSEN2Q8NCE0 465 aaKnown RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 CHST14Q8NCH0 376 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 FLCNQ8NFG4 579 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 OR2A12Q8NGT7 310 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 KCNV2Q8TDN2 545 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 TFB1MQ8WVM0 346 aaKnown RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 ERLEC1Q96DZ1 483 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 ZNF599Q96NL3 588 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 GORASP1Q9BQQ3 440 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 CEP41Q9BYV8 373 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 TNKS2Q9H2K2 1166 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 PRSS16Q9NQE7 514 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 UBA2Q9UBT2 640 aaPredicted RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 SLC25A13Q9UJS0 675 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 MMP17Q9ULZ9 603 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 MRPS17Q9Y2R5 130 aaKnown RBP10.06□□□□□ -0.8
CLN8-202ENST00000517514 SIT1Q9Y3P8 196 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 CACNA1IQ9P0X4 2223 aa10.06□□□□□ -0.8
CLN8-202ENST00000517514 BPTFQ12830 3046 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 ZSCAN5CA6NGD5 496 aaPredicted RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 H7C0C1 242 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 KIF2AO00139 706 aaPredicted RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 PPP1R12AO14974 1030 aaPredicted RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 INSIG1O15503 277 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 SIN3BO75182 1162 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 JCHAINP01591 159 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 TUBB4AP04350 444 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 HLA-DQB2P05538 268 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 CTSLP07711 333 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 MMP2P08253 660 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 CCNB1P14635 433 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 NTSR1P30989 418 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 ATP5OP48047 213 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 COPAP53621 1224 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 NIPAL4Q0D2K0 466 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 AP1B1Q10567 949 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 MTAPQ13126 283 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 CAMK2GQ13555 558 aaPredicted RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 HNRNPDQ14103 355 aaKnown RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 LRRC32Q14392 662 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 FNDC3BQ53EP0 1204 aaKnown RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 ATXN7L2Q5T6C5 722 aaPredicted RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 TMCO4Q5TGY1 634 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 CCDC181Q5TID7 509 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 BZW1Q7L1Q6 419 aaKnown RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 ZNF572Q7Z3I7 529 aaPredicted RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 PRUNE1Q86TP1 453 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 ZNF354CQ86Y25 554 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 ZNF567Q8N184 647 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 C12orf50Q8NA57 414 aaPredicted RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 ATP11CQ8NB49 1132 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 TTC13Q8NBP0 860 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 CCNYQ8ND76 341 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms