RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SLC39A7Q92504 469 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 NAF1Q96HR8 494 aaKnown RBP8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 APOLD1Q96LR9 279 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 DDX50Q9BQ39 737 aaKnown RBP8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 NRSN2Q9GZP1 204 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 DNAI2Q9GZS0 605 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 TKTL2Q9H0I9 626 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 OSBPL2Q9H1P3 480 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 NOL6Q9H6R4 1146 aaKnown RBP8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 CPNE5Q9HCH3 593 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 ASCL3Q9NQ33 180 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 KLHL11Q9NVR0 708 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 ASNSD1Q9NWL6 643 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 APEX2Q9UBZ4 518 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 TMEM59LQ9UK28 342 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 VPS28Q9UK41 221 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 CEP83Q9Y592 693 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 SHROOM3Q8TF72 1996 aa8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 TDRD6O60522 2096 aaKnown RBP8.47□□□□□ -1.05
SCARNA20.3-201ENST00000516913 TEX15Q9BXT5 2789 aa8.46□□□□□ -1.05
SCARNA20.3-201ENST00000516913 USP9XQ93008 2570 aaPredicted RBP8.46□□□□□ -1.05
SCARNA20.3-201ENST00000516913 PRAMEF26H0Y7S4 382 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 K7ESM1 405 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 EPHB6O15197 1021 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 HSF2BPO75031 334 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 LEFTY1O75610 366 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PAK4O96013 591 aaPredicted RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GLI1P08151 1106 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CKMT1AP12532 417 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PLA2G2AP14555 144 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CCR1P32246 355 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CDH5P33151 784 aaPredicted RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 USP8P40818 1118 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ABCG1P45844 678 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GABRB2P47870 512 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 KLK7P49862 253 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CDH4P55283 916 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 RNASE9P60153 205 aaKnown RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SKOR1P84550 965 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SRSF6Q13247 344 aaKnown RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SLC12A1Q13621 1099 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 E2F5Q15329 346 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CAMK4Q16566 473 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 HSP90AA4PQ58FG1 418 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 LRRC73Q5JTD7 316 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PERM1Q5SV97 790 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 MANEALQ5VSG8 457 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CRTC1Q6UUV9 634 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 Q6ZSR6 202 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 C11orf57Q6ZUT1 292 aaPredicted RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PARS2Q7L3T8 475 aaKnown RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NOP9Q86U38 636 aaKnown RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PRPF39Q86UA1 669 aaKnown RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 IQCHQ86VS3 1027 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 RBFAQ8N0V3 343 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CACTIN-AS1Q8N1I8 211 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 EMC1Q8N766 993 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ATP6V0D2Q8N8Y2 350 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TMIEQ8NEW7 156 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 OR6K2Q8NGY2 324 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GRIN3AQ8TCU5 1115 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SLC20A1Q8WUM9 679 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 FGF11Q92914 225 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 KLHDC7BQ96G42 594 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CLPBQ9H078 707 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 KDM4CQ9H3R0 1056 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 RABGEF1Q9UJ41 708 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 DNAJC12Q9UKB3 198 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CLCA2Q9UQC9 943 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 FCF1Q9Y324 198 aaKnown RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 FADS3Q9Y5Q0 445 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 FHOD1Q9Y613 1164 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 AK5Q9Y6K8 562 aa8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NYNRINQ9P2P1 1898 aaKnown RBP8.46□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 IGLON5A6NGN9 336 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 E9PAM4 449 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 KPNA3O00505 521 aaPredicted RBP8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SLC7A4O43246 635 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SART1O43290 800 aaKnown RBP8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CLDN11O75508 207 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 MOCS3O95396 460 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NOS2P35228 1153 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ARRB1P49407 418 aaPredicted RBP8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SULT2A1Q06520 285 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PTP4A2Q12974 167 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ZNF177Q13360 481 aaPredicted RBP8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 STAT4Q14765 748 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TBC1D25Q3MII6 688 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 EFHC1Q5JVL4 640 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TAF3Q5VWG9 929 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GUSBP11Q6P575 273 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 C22orf39Q6P5X5 142 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ERN2Q76MJ5 926 aaKnown RBP8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NLRP14Q86W24 1093 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 FAM131BQ86XD5 332 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ATP11CQ8NB49 1132 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 JOSD2Q8TAC2 188 aa8.45□□□□□ -1.06
SCARNA20.3-201ENST00000516913 BAP1Q92560 729 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms