RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 NAXDQ8IW45 347 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 PCDH20Q8N6Y1 951 aaKnown RBP25.01■■□□□ 1.59
SNF8-213ENST00000514929 CHST14Q8NCH0 376 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 TMIEQ8NEW7 156 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 ARHGEF2Q92974 986 aaKnown RBP25.01■■□□□ 1.59
SNF8-213ENST00000514929 SKA1Q96BD8 255 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 CEP44Q9C0F1 390 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 MAGEH1Q9H213 219 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 AASDHPPTQ9NRN7 309 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 IL36AQ9UHA7 158 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 HPCAL4Q9UM19 191 aa25.01■■□□□ 1.59
SNF8-213ENST00000514929 FNDC3AQ9Y2H6 1198 aaKnown RBP25.01■■□□□ 1.59
SNF8-213ENST00000514929 PLXNA2O75051 1894 aa25■■□□□ 1.59
SNF8-213ENST00000514929 CREB3O43889 395 aa25■■□□□ 1.59
SNF8-213ENST00000514929 FTLP02792 175 aaPredicted RBP25■■□□□ 1.59
SNF8-213ENST00000514929 PSMA2P25787 234 aa25■■□□□ 1.59
SNF8-213ENST00000514929 EPHB2P29323 1055 aa25■■□□□ 1.59
SNF8-213ENST00000514929 PPP2CBP62714 309 aa25■■□□□ 1.59
SNF8-213ENST00000514929 PPP2CAP67775 309 aa25■■□□□ 1.59
SNF8-213ENST00000514929 OGDHQ02218 1023 aa25■■□□□ 1.59
SNF8-213ENST00000514929 CCDC15Q0P6D6 951 aa25■■□□□ 1.59
SNF8-213ENST00000514929 PLEKHA7Q6IQ23 1121 aa25■■□□□ 1.59
SNF8-213ENST00000514929 PRPF39Q86UA1 669 aaKnown RBP25■■□□□ 1.59
SNF8-213ENST00000514929 DNAAF5Q86Y56 855 aa25■■□□□ 1.59
SNF8-213ENST00000514929 GRIN3AQ8TCU5 1115 aa25■■□□□ 1.59
SNF8-213ENST00000514929 SERAC1Q96JX3 654 aa25■■□□□ 1.59
SNF8-213ENST00000514929 CNTNAP3BQ96NU0 1288 aa25■■□□□ 1.59
SNF8-213ENST00000514929 CAMK1GQ96NX5 476 aa25■■□□□ 1.59
SNF8-213ENST00000514929 EPAS1Q99814 870 aa25■■□□□ 1.59
SNF8-213ENST00000514929 CNTNAP3Q9BZ76 1288 aa25■■□□□ 1.59
SNF8-213ENST00000514929 FZD10Q9ULW2 581 aa25■■□□□ 1.59
SNF8-213ENST00000514929 PCDHB9Q9Y5E1 797 aa25■■□□□ 1.59
SNF8-213ENST00000514929 C10orf142B7Z368 130 aa24.99■■□□□ 1.59
SNF8-213ENST00000514929 DDX3XO00571 662 aaKnown RBP eCLIP24.99■■□□□ 1.594e-14■■■■■ 27.5
SNF8-213ENST00000514929 VILLO15195 856 aa24.99■■□□□ 1.59
SNF8-213ENST00000514929 GEMIN4P57678 1058 aaKnown RBP24.99■■□□□ 1.59
SNF8-213ENST00000514929 POLD3Q15054 466 aaPredicted RBP24.99■■□□□ 1.59
SNF8-213ENST00000514929 SKOR2Q2VWA4 1001 aaPredicted RBP24.99■■□□□ 1.59
SNF8-213ENST00000514929 TDRD12Q587J7 1177 aaKnown RBP24.99■■□□□ 1.59
SNF8-213ENST00000514929 ARSIQ5FYB1 569 aa24.99■■□□□ 1.59
SNF8-213ENST00000514929 DPY19L3Q6ZPD9 716 aa24.99■■□□□ 1.59
SNF8-213ENST00000514929 ZNF354CQ86Y25 554 aa24.99■■□□□ 1.59
SNF8-213ENST00000514929 RTL3Q8N8U3 475 aaKnown RBP24.99■■□□□ 1.59
SNF8-213ENST00000514929 SETD7Q8WTS6 366 aaKnown RBP24.99■■□□□ 1.59
SNF8-213ENST00000514929 FCF1Q9Y324 198 aaKnown RBP24.99■■□□□ 1.59
SNF8-213ENST00000514929 A0A1W2PQJ5 194 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 KCNK3O14649 394 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 LATO43561 262 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 ZNF821O75541 412 aaPredicted RBP24.98■■□□□ 1.59
SNF8-213ENST00000514929 CD38P28907 300 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 MAT2AP31153 395 aaKnown RBP24.98■■□□□ 1.59
SNF8-213ENST00000514929 CTSKP43235 329 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 SHC2P98077 582 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 CARD16Q5EG05 197 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 ARRDC3Q96B67 414 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 ZNF653Q96CK0 615 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 PPP1R16AQ96I34 528 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 CNOT8Q9UFF9 292 aaKnown RBP24.98■■□□□ 1.59
SNF8-213ENST00000514929 ACTL7AQ9Y615 435 aa24.98■■□□□ 1.59
SNF8-213ENST00000514929 CXorf51AA0A1B0GTR3 108 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 LEFTY1O75610 366 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 PBX1P40424 430 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 FAM193AP78312 1265 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 SLC45A4Q5BKX6 768 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 KCNT1Q5JUK3 1230 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 PIP5KL1Q5T9C9 394 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 CPLX3Q8WVH0 158 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 TRIM11Q96F44 468 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 HEPHQ9BQS7 1158 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 TM6SF2Q9BZW4 377 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 CATSPERBQ9H7T0 1116 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 PREBQ9HCU5 417 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 PCDHGB2Q9Y5G2 931 aa24.97■■□□□ 1.59
SNF8-213ENST00000514929 TMEM191CA6NGB0 347 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 H0Y8X5 98 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 RNF8O76064 485 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 CD160O95971 181 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 NUDT1P36639 197 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 CCNHP51946 323 aaPredicted RBP24.96■■□□□ 1.59
SNF8-213ENST00000514929 TAS2R38P59533 333 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 SUZ12Q15022 739 aaKnown RBP24.96■■□□□ 1.59
SNF8-213ENST00000514929 TRIP6Q15654 476 aaKnown RBP24.96■■□□□ 1.59
SNF8-213ENST00000514929 NAPEPLDQ6IQ20 393 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 LEKR1Q6ZMV7 388 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 TRIM69Q86WT6 500 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 RYBPQ8N488 228 aaPredicted RBP24.96■■□□□ 1.59
SNF8-213ENST00000514929 ISG20Q96AZ6 181 aaKnown RBP24.96■■□□□ 1.59
SNF8-213ENST00000514929 IFNKQ9P0W0 207 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 ARHGAP20Q9P2F6 1191 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 MYO1AQ9UBC5 1043 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 HECAQ9UBI9 543 aaPredicted RBP24.96■■□□□ 1.59
SNF8-213ENST00000514929 DMTF1Q9Y222 760 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 BZW2Q9Y6E2 419 aaKnown RBP24.96■■□□□ 1.59
SNF8-213ENST00000514929 SCINQ9Y6U3 715 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 WASF2Q9Y6W5 498 aa24.96■■□□□ 1.59
SNF8-213ENST00000514929 RNF103O00237 685 aa24.95■■□□□ 1.58
SNF8-213ENST00000514929 WNT9AO14904 365 aa24.95■■□□□ 1.58
SNF8-213ENST00000514929 FLRT2O43155 660 aa24.95■■□□□ 1.58
SNF8-213ENST00000514929 KDELR3O43731 214 aa24.95■■□□□ 1.58
SNF8-213ENST00000514929 WNT1P04628 370 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms