RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 GLDCP23378 1020 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 COILP38432 576 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 ATP5OP48047 213 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 MRPS21P82921 87 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 NSUN2Q08J23 767 aaKnown RBP eCLIP12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 PON2Q15165 354 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 ALG1LQ6GMV1 187 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 DARS2Q6PI48 645 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 C4orf22Q6V702 233 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 ZC3H18Q86VM9 953 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 CEP112Q8N8E3 955 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 GRK7Q8WTQ7 553 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 NSMCE1Q8WV22 266 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 C1orf54Q8WWF1 131 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 ATG4AQ8WYN0 398 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 EDAQ92838 391 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 MAGOHBQ96A72 148 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 PSKH2Q96QS6 385 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 AP1M1Q9BXS5 423 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 TMEM245Q9H330 911 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 HAUS2Q9NVX0 235 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 UBA2Q9UBT2 640 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 MUTYHQ9UIF7 546 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 TRHDEQ9UKU6 1024 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 HCN2Q9UL51 889 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 PLA2G4CQ9UP65 541 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 KANSL1LA0AUZ9 987 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 GCATO75600 419 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 STK10O94804 968 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 SRCP12931 536 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 CES1P23141 567 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 RBL1P28749 1068 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 NNMTP40261 264 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 CTSOP43234 321 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 CSNK1DP48730 415 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 SIGLEC14Q08ET2 396 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 AP1B1Q10567 949 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 WASHC5Q12768 1159 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 LBRQ14739 615 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 P3H1Q32P28 736 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 TEX44Q53QW1 395 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 RALGPS1Q5JS13 557 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 DNTTIP2Q5QJE6 756 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 MARC1Q5VT66 337 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 TTC27Q6P3X3 843 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 CCDC137Q6PK04 289 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 SYDE1Q6ZW31 735 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 TRMT11Q7Z4G4 463 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 BBS5Q8N3I7 341 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 ALLCQ8N6M5 410 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 PCDH20Q8N6Y1 951 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 NETO2Q8NC67 525 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 TEKT5Q96M29 485 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 RBM12Q9NTZ6 932 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 SEPT3Q9UH03 358 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 FBXL21Q9UKT6 434 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 ZNF148Q9UQR1 794 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 ATP8A1Q9Y2Q0 1164 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 NEU2Q9Y3R4 380 aa12.19□□□□□ -0.46
PDLIM5-220ENST00000514830 CHURC1-FNTBB4DL54 471 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 RNF103O00237 685 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 OPHN1O60890 802 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 ZNF821O75541 412 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 TMCC1O94876 653 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 GSRP00390 522 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 MT-CO1P00395 513 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 EGFP01133 1207 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 CHRNB1P11230 501 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 CR2P20023 1033 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 PTPN3P26045 913 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 MMP13P45452 471 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 ST8SIA6P61647 398 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 SLC10A7Q0GE19 358 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 FZD5Q13467 585 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 DHX34Q14147 1143 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 LRRC32Q14392 662 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 ZNF234Q14588 700 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 CYTH1Q15438 398 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 SLC14A2Q15849 920 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 BMP8AQ7Z5Y6 402 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 ZNF354CQ86Y25 554 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 SFTPA1Q8IWL2 248 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 KLHDC8BQ8IXV7 354 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 CNTD1Q8N815 330 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 USP33Q8TEY7 942 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 FRS2Q8WU20 508 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 PBXIP1Q96AQ6 731 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 CLDN23Q96B33 292 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 ZNF419Q96HQ0 510 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 SPATA13Q96N96 652 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 PPP1R2P1Q96PQ5 205 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 GABRG3Q99928 467 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 FAM118BQ9BPY3 351 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 MGME1Q9BQP7 344 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 TMEM121Q9BTD3 319 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 IER2Q9BTL4 223 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 CIPCQ9C0C6 399 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 DDX47Q9H0S4 455 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 LTB4R2Q9NPC1 389 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 LHX3Q9UBR4 397 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms