RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 A0A0U1RQJ8 604 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 LRRD1A4D1F6 860 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 BTNL10A8MVZ5 291 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 IGLV3-19P01714 112 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 OXTRP30559 389 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 RECQLP46063 649 aaPredicted RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 DHPSP49366 369 aaPredicted RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 RPL6Q02878 288 aaKnown RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 TTC31Q49AM3 519 aaPredicted RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 ANKRD20A8PQ5CZ79 823 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 CARD16Q5EG05 197 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 DPY19L3Q6ZPD9 716 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 ARHGAP36Q6ZRI8 547 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 DSG4Q86SJ6 1040 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 LRRC8AQ8IWT6 810 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 RHOT1Q8IXI2 618 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 PCDH20Q8N6Y1 951 aaKnown RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 CHST14Q8NCH0 376 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 PCDH19Q8TAB3 1148 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 CCDC114Q96M63 670 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 HINFPQ9BQA5 517 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 TM6SF2Q9BZW4 377 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 FBXL12Q9NXK8 326 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 GMEB2Q9UKD1 530 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 SARDHQ9UL12 918 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 PPM1HQ9ULR3 514 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 SCML1Q9UN30 329 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 NCKAP1Q9Y2A7 1128 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 A0A1W2PP55 124 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 ALOX15BO15296 676 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 PRAMEF11O60813 436 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 TMCC1O94876 653 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 ADH1BP00325 375 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 RETP07949 1114 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 CHRNA3P32297 505 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 METAP1P53582 386 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 KIF5AQ12840 1032 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 POM121L1PQ3SYA9 428 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 ARMCX6Q7L4S7 300 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 DAAM2Q86T65 1068 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 PIP4K2CQ8TBX8 421 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 RUBCNQ92622 972 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 ISG20Q96AZ6 181 aaKnown RBP14.21□□□□□ -0.14
USP46-209ENST00000514536 RNF25Q96BH1 459 aaPredicted RBP14.21□□□□□ -0.14
USP46-209ENST00000514536 LOXL4Q96JB6 756 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 OMDQ99983 421 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 ZNF670Q9BS34 389 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 GPR174Q9BXC1 333 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 PDFQ9HBH1 243 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 DDX56Q9NY93 547 aaKnown RBP14.21□□□□□ -0.14
USP46-209ENST00000514536 UBA2Q9UBT2 640 aaPredicted RBP14.21□□□□□ -0.14
USP46-209ENST00000514536 TRIM10Q9UDY6 481 aa14.21□□□□□ -0.14
USP46-209ENST00000514536 IPO11Q9UI26 975 aaKnown RBP14.21□□□□□ -0.14
USP46-209ENST00000514536 FAM186AA6NE01 2351 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 EML5Q05BV3 1969 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 PLK4O00444 970 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 RNASEH2AO75792 299 aaKnown RBP14.2□□□□□ -0.14
USP46-209ENST00000514536 KRT1P04264 644 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 CTSLP07711 333 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 C5AR1P21730 350 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 ACSL1P33121 698 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 PTGER3P43115 390 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 SFSWAPQ12872 951 aaKnown RBP14.2□□□□□ -0.14
USP46-209ENST00000514536 CYTH1Q15438 398 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 INO80DQ53TQ3 878 aaPredicted RBP14.2□□□□□ -0.14
USP46-209ENST00000514536 ODF2Q5BJF6 829 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 ARSIQ5FYB1 569 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 FAM46CQ5VWP2 391 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 C11orf63Q6NUN7 778 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 USP30Q70CQ3 517 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 TXLNBQ8N3L3 684 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 RYBPQ8N488 228 aaPredicted RBP14.2□□□□□ -0.14
USP46-209ENST00000514536 HDDC3Q8N4P3 179 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 AADATQ8N5Z0 425 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 PQLC3Q8N755 202 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 CCDC112Q8NEF3 446 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 CASKIN2Q8WXE0 1202 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 FAF2Q96CS3 445 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 CALR3Q96L12 384 aaKnown RBP14.2□□□□□ -0.14
USP46-209ENST00000514536 NEUROG2Q9H2A3 272 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 ARRDC1-AS1Q9H2J1 176 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 SP110Q9HB58 689 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 HECAQ9UBI9 543 aaPredicted RBP14.2□□□□□ -0.14
USP46-209ENST00000514536 SERGEFQ9UGK8 458 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 ADGRG1Q9Y653 693 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 GPR179Q6PRD1 2367 aa14.2□□□□□ -0.14
USP46-209ENST00000514536 SDK1Q7Z5N4 2213 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 ABCA7Q8IZY2 2146 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 MACROD2A1Z1Q3 448 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 C3orf70A6NLC5 250 aaPredicted RBP14.19□□□□□ -0.14
USP46-209ENST00000514536 C1QTNF3-AMACRE9PGA6 284 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 RNF103O00237 685 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 ARHGAP6O43182 974 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 PRNPP04156 253 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 SERPINB6P35237 376 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 CCNHP51946 323 aaPredicted RBP14.19□□□□□ -0.14
USP46-209ENST00000514536 CREB5Q02930 508 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 ZNF33AQ06730 810 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 IL10RBQ08334 325 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 MYLK3Q32MK0 819 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms