RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 HSPA8P11142 646 aaKnown RBP15.19■□□□□ 0.02
VCAN-211ENST00000513984 ELF1P32519 619 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 CREMQ03060 361 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 SLC10A7Q0GE19 358 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 TAF12Q16514 161 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 PCID2Q5JVF3 399 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 ARMC3Q5W041 872 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 KDELC1Q6UW63 502 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 RANBP10Q6VN20 620 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 CDHR3Q6ZTQ4 885 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 SPATA21Q7Z572 469 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.19■□□□□ 0.02
VCAN-211ENST00000513984 NSMCE1Q8WV22 266 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 PTCD2Q8WV60 388 aaKnown RBP15.19■□□□□ 0.02
VCAN-211ENST00000513984 AUTS2Q8WXX7 1259 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 SPOCK2Q92563 424 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 ZNF75CPQ92670 426 aaPredicted RBP15.19■□□□□ 0.02
VCAN-211ENST00000513984 PABPC5Q96DU9 382 aaKnown RBP15.19■□□□□ 0.02
VCAN-211ENST00000513984 FAM111AQ96PZ2 611 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 FSD1LQ9BXM9 530 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 PITPNM3Q9BZ71 974 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 RXFP1Q9HBX9 757 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 VPS45Q9NRW7 570 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 IL1RAPL1Q9NZN1 696 aa15.19■□□□□ 0.02
VCAN-211ENST00000513984 PRAMEF11O60813 436 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 EDF1O60869 148 aaKnown RBP15.18■□□□□ 0.02
VCAN-211ENST00000513984 ITGA2BP08514 1039 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 CDH4P55283 916 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 CORO7P57737 925 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 RABGAP1LQ5R372 815 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 GRTP1Q5TC63 336 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 RFWD3Q6PCD5 774 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 POTEHQ6S545 545 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 DNAJB7Q7Z6W7 309 aaPredicted RBP15.18■□□□□ 0.02
VCAN-211ENST00000513984 KLHL5Q96PQ7 755 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 KLF16Q9BXK1 252 aaPredicted RBP15.18■□□□□ 0.02
VCAN-211ENST00000513984 IQCGQ9H095 443 aaKnown RBP15.18■□□□□ 0.02
VCAN-211ENST00000513984 ZBP1Q9H171 429 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 ARNT2Q9HBZ2 717 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 MRM3Q9HC36 420 aaKnown RBP15.18■□□□□ 0.02
VCAN-211ENST00000513984 NT5MQ9NPB1 228 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 TXNDC16Q9P2K2 825 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 PLLPQ9Y342 182 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 STARD13Q9Y3M8 1113 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 PCDHB12Q9Y5F1 795 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 ANKRD36A6QL64 1941 aa15.18■□□□□ 0.02
VCAN-211ENST00000513984 C2orf78A6NCI8 922 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 TEX28O15482 410 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PMPCBO75439 489 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 KLKB1P03952 638 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 ALDOAP04075 364 aaKnown RBP15.17■□□□□ 0.02
VCAN-211ENST00000513984 LINC00271P0C7V0 271 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 NMBRP28336 390 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 CORO1AP31146 461 aaKnown RBP15.17■□□□□ 0.02
VCAN-211ENST00000513984 CRHR1P34998 444 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 ACVRL1P37023 503 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 EPHB3P54753 998 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 HTRA4P83105 476 aaPredicted RBP15.17■□□□□ 0.02
VCAN-211ENST00000513984 TEDDM1Q5T9Z0 273 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PKN3Q6P5Z2 889 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 FAM47EQ6ZV65 393 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 OTOP2Q7RTS6 562 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 TMEM150AQ86TG1 271 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 KCNMB4Q86W47 210 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 ZNF354CQ86Y25 554 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 DENND1CQ8IV53 801 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 ISL2Q96A47 359 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 TADA1Q96BN2 335 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PRICKLE1Q96MT3 831 aaPredicted RBP15.17■□□□□ 0.02
VCAN-211ENST00000513984 RBBP8Q99708 897 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 RNF38Q9H0F5 515 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 MAGEH1Q9H213 219 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PDFQ9HBH1 243 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 ATP13A1Q9HD20 1204 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PCMTD2Q9NV79 361 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PHTF1Q9UMS5 762 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 HELZP42694 1942 aaKnown RBP15.17■□□□□ 0.02
VCAN-211ENST00000513984 H3BNC9 293 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 FGF18O76093 207 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 MMP2P08253 660 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 LIMK2P53671 638 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 WNT3AP56704 352 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 TMCO4Q5TGY1 634 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PDPK2PQ6A1A2 396 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 NDUFAF2Q8N183 169 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 CFAP52Q8N1V2 620 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PPHLN1Q8NEY8 458 aaKnown RBP15.17■□□□□ 0.02
VCAN-211ENST00000513984 ZNF599Q96NL3 588 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PLCD4Q9BRC7 762 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 MCMBPQ9BTE3 642 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 ZMYND15Q9H091 742 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 SLCO1B3Q9NPD5 702 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 PRKAG3Q9UGI9 489 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 TCAF1Q9Y4C2 921 aa15.17■□□□□ 0.02
VCAN-211ENST00000513984 ZFP37Q9Y6Q3 630 aaPredicted RBP15.17■□□□□ 0.02
VCAN-211ENST00000513984 TPP1O14773 563 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 CLDN11O75508 207 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 CTSAP10619 480 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 HOXD9P28356 352 aaPredicted RBP15.16■□□□□ 0.02
VCAN-211ENST00000513984 SERPINB4P48594 390 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms