RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 C22orf39Q6P5X5 142 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 NYAP1Q6ZVC0 841 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 VSIG1Q86XK7 387 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 PGBD5Q8N414 524 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 CHST14Q8NCH0 376 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 C1orf54Q8WWF1 131 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 P3H4Q92791 437 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 PTPRN2Q92932 1015 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 ACDQ96AP0 544 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 NSMCE3Q96MG7 304 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 NAPGQ99747 312 aaPredicted RBP11.54□□□□□ -0.56
HTT-213ENST00000513806 GABRG3Q99928 467 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 CARD9Q9H257 536 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 RETREG1Q9H6L5 497 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 PRSS16Q9NQE7 514 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 LHX3Q9UBR4 397 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 SNX12Q9UMY4 172 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 HS3ST2Q9Y278 367 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 WDFY4Q6ZS81 3184 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 TCRBV21S2A2A0A5A6 115 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 CHURC1-FNTBB4DL54 471 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 H7C0C1 242 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 PLK4O00444 970 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 ATP9BO43861 1147 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 TJP3O95049 919 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 FGGP02679 453 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 ZFXP17010 805 aaPredicted RBP11.53□□□□□ -0.56
HTT-213ENST00000513806 CETN2P41208 172 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 RPS9P46781 194 aaKnown RBP11.53□□□□□ -0.56
HTT-213ENST00000513806 ATP5OP48047 213 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 CLCN6P51797 869 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 EIF3EP60228 445 aaKnown RBP11.53□□□□□ -0.56
HTT-213ENST00000513806 ZBTB17Q13105 803 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 ENPP2Q13822 863 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 NOMO1Q15155 1222 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 CRY1Q16526 586 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 LONRF2Q1L5Z9 754 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 EOGTQ5NDL2 527 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 C9orf64Q5T6V5 341 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 HEATR6Q6AI08 1181 aaKnown RBP11.53□□□□□ -0.56
HTT-213ENST00000513806 RETSATQ6NUM9 610 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 BMP8AQ7Z5Y6 402 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 PRUNE1Q86TP1 453 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 CCDC13Q8IYE1 715 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 MAML2Q8IZL2 1156 aaPredicted RBP11.53□□□□□ -0.56
HTT-213ENST00000513806 SYNPOQ8N3V7 929 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 RYBPQ8N488 228 aaPredicted RBP11.53□□□□□ -0.56
HTT-213ENST00000513806 DTWD2Q8NBA8 298 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 TSEN2Q8NCE0 465 aaKnown RBP11.53□□□□□ -0.56
HTT-213ENST00000513806 LRFN3Q9BTN0 628 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 CD248Q9HCU0 757 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 NT5MQ9NPB1 228 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 LRRK1Q38SD2 2015 aa11.53□□□□□ -0.56
HTT-213ENST00000513806 MYLKQ15746 1914 aa11.52□□□□□ -0.56
HTT-213ENST00000513806 CTAGE9A4FU28 777 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 APOC4-APOC2K7ER74 178 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 GPR37L1O60883 481 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 JCHAINP01591 159 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 APOC2P02655 101 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 HLA-DQB2P05538 268 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 CTSLP07711 333 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 RBL1P28749 1068 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 CASQ1P31415 396 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 COPAP53621 1224 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 RHOAP61586 193 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 ETF1P62495 437 aaKnown RBP11.52□□□□□ -0.57
HTT-213ENST00000513806 PPIDQ08752 370 aaKnown RBP11.52□□□□□ -0.57
HTT-213ENST00000513806 LBRQ14739 615 aaKnown RBP11.52□□□□□ -0.57
HTT-213ENST00000513806 PRKD1Q15139 912 aaPredicted RBP11.52□□□□□ -0.57
HTT-213ENST00000513806 HNRNPA1L2Q32P51 320 aaKnown RBP11.52□□□□□ -0.57
HTT-213ENST00000513806 SDE2Q6IQ49 451 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 ANO7Q6IWH7 933 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 DPY19L3Q6ZPD9 716 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 SYT13Q7L8C5 426 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 MMAAQ8IVH4 418 aaKnown RBP11.52□□□□□ -0.57
HTT-213ENST00000513806 SPEM1Q8N4L4 309 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 GRIN3AQ8TCU5 1115 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 HMGB4Q8WW32 186 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 ZNF592Q92610 1267 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 HDAC11Q96DB2 347 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 QKIQ96PU8 341 aaKnown RBP eCLIP11.52□□□□□ -0.57
HTT-213ENST00000513806 CINPQ9BW66 212 aaPredicted RBP11.52□□□□□ -0.57
HTT-213ENST00000513806 AP1M1Q9BXS5 423 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 TPSD1Q9BZJ3 242 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 MKRN2Q9H000 416 aaKnown RBP11.52□□□□□ -0.57
HTT-213ENST00000513806 DONSONQ9NYP3 566 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 EVLQ9UI08 416 aaPredicted RBP11.52□□□□□ -0.57
HTT-213ENST00000513806 SARDHQ9UL12 918 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 DNPEPQ9ULA0 475 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 SLC8A2Q9UPR5 921 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 INVSQ9Y283 1065 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 TTLL3Q9Y4R7 772 aa11.52□□□□□ -0.57
HTT-213ENST00000513806 ABCA7Q8IZY2 2146 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 THADAQ6YHU6 1953 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 PRR33A8MZF0 331 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 K7ESF4 209 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 PDE2AO00408 941 aaPredicted RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 PPP1R12AO14974 1030 aaPredicted RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 MATN3O15232 486 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms