RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ABCB4P21439 1286 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ACSL1P33121 698 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 CDH5P33151 784 aaPredicted RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 NOS2P35228 1153 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 PAFAH1B1P43034 410 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 GALCP54803 685 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 HADHBP55084 474 aaKnown RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 PTPN20Q4JDL3 420 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 CCDC70Q6NSX1 233 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 WDR93Q6P2C0 686 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 MMS22LQ6ZRQ5 1243 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 USP30Q70CQ3 517 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 SLFN11Q7Z7L1 901 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 FAM124AQ86V42 546 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 SLC47A2Q86VL8 602 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ZDHHC17Q8IUH5 632 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 MMGT1Q8N4V1 131 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 LRRC57Q8N9N7 239 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 C1orf131Q8NDD1 294 aaKnown RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 TPCN2Q8NHX9 752 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 CTNNBL1Q8WYA6 563 aaPredicted RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 RFFLQ8WZ73 363 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 SPSB2Q99619 263 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 BTBD1Q9H0C5 482 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 FAM204AQ9H8W3 233 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 SGK2Q9HBY8 427 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 OSGEPQ9NPF4 335 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 DDIT4Q9NX09 232 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 OGFRQ9NZT2 677 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 EIF2B4Q9UI10 523 aaKnown RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 ERVW-1Q9UQF0 538 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 SIN3BO75182 1162 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ZRANB2O95218 330 aaKnown RBP eCLIP10.12□□□□□ -0.79
CCL28-203ENST00000513525 SEMA4FO95754 770 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ERBB2P04626 1255 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 SCNN1AP37088 669 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 NOP2P46087 812 aaKnown RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 GABRB2P47870 512 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 PLK1P53350 603 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 OXCT1P55809 520 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ECT2LQ008S8 904 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 SLC6A3Q01959 620 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 SFSWAPQ12872 951 aaKnown RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 ST3GAL2Q16842 350 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 RABGAP1LQ5R372 815 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 CCDC181Q5TID7 509 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 OR6B2Q6IFH4 312 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 RHOT2Q8IXI1 618 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 NOA1Q8NC60 698 aaKnown RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 OR2I1PQ8NGU4 316 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 PBKQ96KB5 322 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 CAPZA3Q96KX2 299 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 ISCUQ9H1K1 167 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 MIR1-1HGQ9H1L0 117 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 PABPC3Q9H361 631 aaKnown RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 C6orf106Q9H6K1 298 aaPredicted RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 ARFGAP3Q9NP61 516 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 TMEM51Q9NW97 253 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 RRN3Q9NYV6 651 aa10.12□□□□□ -0.79
CCL28-203ENST00000513525 NOCTQ9UK39 431 aaKnown RBP10.12□□□□□ -0.79
CCL28-203ENST00000513525 IGF2RP11717 2491 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 TRPM6Q9BX84 2022 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 TDRD6O60522 2096 aaKnown RBP10.11□□□□□ -0.79
CCL28-203ENST00000513525 EDDM13A0A1B0GTR0 161 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 C10orf142B7Z368 130 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 PDE2AO00408 941 aaPredicted RBP10.11□□□□□ -0.79
CCL28-203ENST00000513525 ZNF185O15231 689 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 RNASEH1O60930 286 aaKnown RBP10.11□□□□□ -0.79
CCL28-203ENST00000513525 RTN2O75298 545 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 GRAP2O75791 330 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 CER1O95813 267 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 CYP11B1P15538 503 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 MATKP42679 507 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 CTSOP43234 321 aaPredicted RBP10.11□□□□□ -0.79
CCL28-203ENST00000513525 GRIA4P48058 902 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 AFF3P51826 1226 aaKnown RBP10.11□□□□□ -0.79
CCL28-203ENST00000513525 BNC1Q01954 994 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 SULT2A1Q06520 285 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 RPS6KA1Q15418 735 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 C5orf22Q49AR2 442 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 C9orf64Q5T6V5 341 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 OTUD1Q5VV17 481 aaPredicted RBP10.11□□□□□ -0.79
CCL28-203ENST00000513525 CXorf57Q6NSI4 855 aaKnown RBP10.11□□□□□ -0.79
CCL28-203ENST00000513525 FBXL22Q6P050 247 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 IL27RAQ6UWB1 636 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 ZNF677Q86XU0 584 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 APCDD1Q8J025 514 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 TMEM35BQ8NCS4 154 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 EPS8L1Q8TE68 723 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 COG1Q8WTW3 980 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 PTPRN2Q92932 1015 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 NT5C3BQ969T7 300 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 BIRC7Q96CA5 298 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 PGAP3Q96FM1 320 aaPredicted RBP10.11□□□□□ -0.79
CCL28-203ENST00000513525 NPY6RQ99463 290 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 MTG2Q9H4K7 406 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 SYNCQ9H7C4 482 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 ZNF446Q9NWS9 450 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms