RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 FNBP1LQ5T0N5 605 aa11.4□□□□□ -0.58
TCOF1-211ENST00000513346 MIER2Q8N344 545 aa11.4□□□□□ -0.58
TCOF1-211ENST00000513346 TTC30BQ8N4P2 665 aa11.4□□□□□ -0.58
TCOF1-211ENST00000513346 KREMEN1Q96MU8 473 aa11.4□□□□□ -0.58
TCOF1-211ENST00000513346 APOL2Q9BQE5 337 aa11.4□□□□□ -0.58
TCOF1-211ENST00000513346 UGT2B28Q9BY64 529 aa11.4□□□□□ -0.58
TCOF1-211ENST00000513346 PCDH18Q9HCL0 1135 aa11.4□□□□□ -0.58
TCOF1-211ENST00000513346 PIH1D1Q9NWS0 290 aaKnown RBP11.4□□□□□ -0.58
TCOF1-211ENST00000513346 FAM32AQ9Y421 112 aaKnown RBP11.4□□□□□ -0.58
TCOF1-211ENST00000513346 MTF2Q9Y483 593 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-211ENST00000513346 ASTN2O75129 1339 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-211ENST00000513346 MYH10P35580 1976 aa11.4□□□□□ -0.58
TCOF1-211ENST00000513346 CLDN25C9JDP6 229 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 STX7O15400 261 aaKnown RBP11.4□□□□□ -0.59
TCOF1-211ENST00000513346 HOXA2O43364 376 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 HS6ST1O60243 411 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 ERVK-10P10266 1014 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 PTPN11Q06124 597 aaPredicted RBP11.4□□□□□ -0.59
TCOF1-211ENST00000513346 DGCR6Q14129 220 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 DDX53Q86TM3 631 aaKnown RBP11.4□□□□□ -0.59
TCOF1-211ENST00000513346 AMER2Q8N7J2 671 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 ACTRT2Q8TDY3 377 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 TAMM41Q96BW9 452 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 PPP1R10Q96QC0 940 aaKnown RBP11.4□□□□□ -0.59
TCOF1-211ENST00000513346 RNF208Q9H0X6 261 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 C8orf4Q9NR00 106 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 RGS17Q9UGC6 210 aaPredicted RBP11.4□□□□□ -0.59
TCOF1-211ENST00000513346 CARD8Q9Y2G2 431 aa11.4□□□□□ -0.59
TCOF1-211ENST00000513346 A0A1B0GW55 424 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SIGLEC16A6NMB1 481 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 M0QYT0 321 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 KATNA1O75449 491 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 TIPRLO75663 272 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SOAT2O75908 522 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 DUX4L2P0CJ85 424 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 DUX4L3P0CJ86 424 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 DUX4L4P0CJ87 422 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 DUX4L5P0CJ88 424 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 DUX4L6P0CJ89 424 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 DUX4L7P0CJ90 424 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 CXCL8P10145 99 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 ITGA7Q13683 1181 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 MPP2Q14168 576 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SFT2D3Q587I9 215 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 KCNT2Q6UVM3 1135 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 WDR49Q8IV35 697 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 MAP4K3Q8IVH8 894 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 FLCNQ8NFG4 579 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 C7orf43Q8WVR3 580 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 LENG8Q96PV6 779 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-211ENST00000513346 TMEM245Q9H330 911 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 DUX4Q9UBX2 424 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 ZSCAN9O15535 394 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-211ENST00000513346 CA12O43570 354 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 HMGCRP04035 888 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 ETFBP38117 255 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 GRIA4P48058 902 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 VAC14Q08AM6 782 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 BNIP2Q12982 314 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 TDRD10Q5VZ19 366 aaKnown RBP11.39□□□□□ -0.59
TCOF1-211ENST00000513346 NPNTQ6UXI9 565 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SLCO6A1Q86UG4 719 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 ST13P5Q8NFI4 369 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-211ENST00000513346 HM13Q8TCT9 377 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 PHF21BQ96EK2 531 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 CASS4Q9NQ75 786 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 IPPQ9Y573 584 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 FAM155BO75949 473 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 LSM3P62310 102 aaKnown RBP11.39□□□□□ -0.59
TCOF1-211ENST00000513346 TUBA4AP68366 448 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 MOGSQ13724 837 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 ILDR2Q71H61 639 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 EFHBQ8N7U6 833 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SEPT8Q92599 483 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SKA1Q96BD8 255 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SERAC1Q96JX3 654 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 C1orf21Q9H246 121 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 CD274Q9NZQ7 290 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 BARX2Q9UMQ3 279 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-211ENST00000513346 EFR3BQ9Y2G0 817 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SNCAIPQ9Y6H5 919 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 TMEM247A6NEH6 219 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 IRF6O14896 467 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 IL12AP29459 219 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 CCT8P50990 548 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 ADAM17P78536 824 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 MYBPC3Q14896 1274 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 PCSK7Q16549 785 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SH3D19Q5HYK7 790 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 POTEHQ6S545 545 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 CDH24Q86UP0 819 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 TRAPPC12Q8WVT3 735 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 DNAJB3Q8WWF6 145 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 NPAS2Q99743 824 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 ACE2Q9BYF1 805 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-211ENST00000513346 UNKQ9C0B0 810 aaKnown RBP11.39□□□□□ -0.59
TCOF1-211ENST00000513346 CACNA2D2Q9NY47 1150 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 AAR2Q9Y312 384 aaKnown RBP11.39□□□□□ -0.59
TCOF1-211ENST00000513346 SLC30A1Q9Y6M5 507 aa11.39□□□□□ -0.59
TCOF1-211ENST00000513346 XRN1Q8IZH2 1706 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms