RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 SLC17A9Q9BYT1 436 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 EPB41L5Q9HCM4 733 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 TMEM8AQ9HCN3 771 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 NCKIPSDQ9NZQ3 722 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 USP25Q9UHP3 1055 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 PADI4Q9UM07 663 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 TRAF3IP3Q9Y228 551 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 PAXBP1Q9Y5B6 917 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 TRPM6Q9BX84 2022 aa11.47□□□□□ -0.57
RNF4-218ENST00000513284 CELSR2Q9HCU4 2923 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 PRAMEF33A0A0G2JMD5 474 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 TYW5A2RUC4 315 aaKnown RBP11.46□□□□□ -0.57
RNF4-218ENST00000513284 K7ERQ8 282 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 CALUO43852 315 aaPredicted RBP11.46□□□□□ -0.57
RNF4-218ENST00000513284 BNIP3LO60238 219 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 PRAMEF10O60809 474 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 PCDH8O95206 1070 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 ITIH1P19827 911 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 CHRNA3P32297 505 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 ADKP55263 362 aaKnown RBP11.46□□□□□ -0.57
RNF4-218ENST00000513284 CCL7P80098 99 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 SPIDRQ14159 915 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 ZC3H12AQ5D1E8 599 aaKnown RBP11.46□□□□□ -0.57
RNF4-218ENST00000513284 MANEAQ5SRI9 462 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.57
RNF4-218ENST00000513284 RESP18Q5W5W9 173 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 KYAT3Q6YP21 454 aaKnown RBP11.46□□□□□ -0.57
RNF4-218ENST00000513284 PARGQ86W56 976 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 CCDC117Q8IWD4 279 aaPredicted RBP11.46□□□□□ -0.57
RNF4-218ENST00000513284 TTC39CQ8N584 583 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 SH2D3CQ8N5H7 860 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 UBR7Q8N806 425 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 FAM174AQ8TBP5 190 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.57
RNF4-218ENST00000513284 CCDC34Q96HJ3 373 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 IL12RB2Q99665 862 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 RAB20Q9NX57 234 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 FOXJ2Q9P0K8 574 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 PCDHA7Q9UN72 937 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 PLAAQ9Y263 795 aa11.46□□□□□ -0.57
RNF4-218ENST00000513284 LRBAP50851 2863 aa11.46□□□□□ -0.58
RNF4-218ENST00000513284 C9orf172C9J069 976 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 LMO7DNF2Z398 122 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 RNF225M0QZC1 329 aaPredicted RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 AGRPO00253 132 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 KPNA3O00505 521 aaPredicted RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 SMAD6O43541 496 aaKnown RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 CALCAP01258 141 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 CELA2BP08218 269 aaPredicted RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 SETSIPP0DME0 302 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 VDRP11473 427 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 SRCP12931 536 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 CCR10P46092 362 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 PFN3P60673 137 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 PITX1P78337 314 aaPredicted RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 EIF3IQ13347 325 aaKnown RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 NNTQ13423 1086 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 PDE1CQ14123 709 aaPredicted RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 FOXD4L6Q3SYB3 417 aaPredicted RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 ARSIQ5FYB1 569 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 KRT39Q6A163 491 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 LCLAT1Q6UWP7 414 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 FOXD4L3Q6VB84 417 aaPredicted RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 INTS8Q75QN2 995 aaKnown RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 ERN2Q76MJ5 926 aaKnown RBP11.45□□□□□ -0.58
RNF4-218ENST00000513284 TAC4Q86UU9 113 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 TMIEQ8NEW7 156 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 WDR48Q8TAF3 677 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 MIS12Q9H081 205 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 ADNPQ9H2P0 1102 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 HESX1Q9UBX0 185 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 PISDQ9UG56 409 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 CACNA1DQ01668 2161 aa11.45□□□□□ -0.58
RNF4-218ENST00000513284 CRYBG3Q68DQ2 2970 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 KCNU1A8MYU2 1149 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 H3BM21 787 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 ZNF821O75541 412 aaPredicted RBP11.44□□□□□ -0.58
RNF4-218ENST00000513284 IGLV3-25P01717 112 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 KRT13P13646 458 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 CD19P15391 556 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 CCKBRP32239 447 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 GTF2H1P32780 548 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 RABIFP47224 123 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 RPIAP49247 311 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 ARSDP51689 593 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 ENPEPQ07075 957 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 ZFP36L1Q07352 338 aaKnown RBP11.44□□□□□ -0.58
RNF4-218ENST00000513284 KCNAB2Q13303 367 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 NCAPHQ15003 741 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 NFIL3Q16649 462 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 PRRT3Q5FWE3 981 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 FBXL22Q6P050 247 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 CHSY1Q86X52 802 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 FAM186BQ8IYM0 893 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 USP7Q93009 1102 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 NAT6Q93015 286 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 SERPINB11Q96P15 392 aa11.44□□□□□ -0.58
RNF4-218ENST00000513284 LENG8Q96PV6 779 aaPredicted RBP11.44□□□□□ -0.58
RNF4-218ENST00000513284 PSMB7Q99436 277 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms