RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 SPANXN2Q5MJ10 180 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 STXBP5Q5T5C0 1151 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 TRIQKQ629K1 86 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 SYT12Q8IV01 421 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 PCDH20Q8N6Y1 951 aaKnown RBP12.64□□□□□ -0.39
COL11A1-210ENST00000512756 WDR36Q8NI36 951 aaKnown RBP12.64□□□□□ -0.39
COL11A1-210ENST00000512756 SOCS4Q8WXH5 440 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 TPD52L3Q96J77 140 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 MRPL57Q9BQC6 102 aaKnown RBP12.64□□□□□ -0.39
COL11A1-210ENST00000512756 MTFR1LQ9H019 292 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 OSGEPL1Q9H4B0 414 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 UBXN8O00124 270 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ABCB1P08183 1280 aaPredicted RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CNPP09543 421 aaKnown RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 FGFR1P11362 822 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CHKAP35790 457 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 TRAF3Q13114 568 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 SLC39A12Q504Y0 691 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PDZK1Q5T2W1 519 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 FBXW8Q8N3Y1 598 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 MBOAT7Q96N66 472 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ACO2Q99798 780 aaKnown RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ALG9Q9H6U8 611 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 DIABLOQ9NR28 239 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 LEF1Q9UJU2 399 aaPredicted RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 NRCAMQ92823 1304 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 TBKBP1A7MCY6 615 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 TRIM38O00635 465 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 TSPAN3O60637 253 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CCDC166P0CW27 439 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 MYL12AP19105 171 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 GABRB2P47870 512 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 DCTN2Q13561 401 aaKnown RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CRY1Q16526 586 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ATP13A4Q4VNC1 1196 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 INO80DQ53TQ3 878 aaPredicted RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PAGE2BQ5JRK9 111 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 INTS11Q5TA45 600 aaKnown RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 DNAJC14Q6Y2X3 702 aaPredicted RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ZNF621Q6ZSS3 439 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PLPPR4Q7Z2D5 763 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 FNIP1Q8TF40 1166 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 C1orf50Q9BV19 199 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ARL15Q9NXU5 204 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CDH9Q9ULB4 789 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 LYPLA2O95372 231 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PARNO95453 639 aaKnown RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PTPRAP18433 802 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PAICSP22234 425 aaKnown RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 SERPINA4P29622 427 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 NUMBP49757 651 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PSME3P61289 254 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 SLC25A3Q00325 362 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 TNK2Q07912 1038 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PFKFB4Q16877 469 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 AAGABQ6PD74 315 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 DHDDSQ86SQ9 333 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 RASGEF1CQ8N431 466 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 UROC1Q96N76 676 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 QRFPRQ96P65 431 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 SPAG4Q9NPE6 437 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ATRNO75882 1429 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ASNA1O43681 348 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 NFICP08651 508 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ANXA5P08758 320 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 SPATA31C1P0DKV0 1188 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CATSPERGQ6ZRH7 1159 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 TRABD2AQ86V40 505 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 EPHX4Q8IUS5 362 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 IQCKQ8N0W5 287 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 MFSD14AQ96MC6 490 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 SEMA6AQ9H2E6 1030 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 EPB41L4BQ9H329 900 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 SEMA4BQ9NPR2 832 aaPredicted RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CARNS1A5YM72 827 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PTGES3LE9PB15 166 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 SPTLC1O15269 473 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CATP04040 527 aaKnown RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 FGRP09769 529 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 VEGFAP15692 232 aaPredicted RBP12.63□□□□□ -0.39
COL11A1-210ENST00000512756 MAPK8P45983 427 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 GRIA4P48058 902 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 ATP1A4Q13733 1029 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CYP2A13Q16696 494 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PROX1Q92786 737 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CDT1Q9H211 546 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 PTPRHQ9HD43 1115 aa12.63□□□□□ -0.39
COL11A1-210ENST00000512756 CASZ1Q86V15 1759 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 MST1RQ04912 1400 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 H3BN98 237 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 TGFB1I1O43294 461 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 CCNB1P14635 433 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 NFKB1P19838 968 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 RAB10P61026 200 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 KCNJ2P63252 427 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 BNIP2Q12982 314 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms