RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 C6orf106Q9H6K1 298 aaPredicted RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 TM9SF3Q9HD45 589 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 ST7Q9NRC1 585 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 SLC12A6Q9UHW9 1150 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 TLR6Q9Y2C9 796 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 ANKRD6Q9Y2G4 727 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 CEP83Q9Y592 693 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP46-208ENST00000512656 ADAMTS9Q9P2N4 1935 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 CKAP5Q14008 2032 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 EDDM13A0A1B0GTR0 161 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 GOLGA6L7A0A1B0GV03 622 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 PCDHGA12O60330 932 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 LUC7L3O95232 432 aaKnown RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 AFPP02771 609 aaKnown RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 SLC2A3P11169 496 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 ACPPP15309 386 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 SLC6A4P31645 630 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 CSKP41240 450 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 GRK6P43250 576 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 GPD2P43304 727 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 RPL34P49207 117 aaKnown RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 CCT8P50990 548 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 SGSHP51688 502 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 OXCT1P55809 520 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 SNX16P57768 344 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 RACK1P63244 317 aaKnown RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 ECT2LQ008S8 904 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 BNC1Q01954 994 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 MTA1Q13330 715 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 SLC12A1Q13621 1099 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 CST6Q15828 149 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 KIF19Q2TAC6 998 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 MS4A13Q5J8X5 152 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 KIAA0895LQ68EN5 471 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 ISM2Q6H9L7 571 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 TTI2Q6NXR4 508 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 CCNI2Q6ZMN8 369 aaPredicted RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 DBX2Q6ZNG2 339 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 RRAGAQ7L523 313 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 ENOSF1Q7L5Y1 443 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 PROSER1Q86XN7 944 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 GALNT15Q8N3T1 639 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 PNPLA1Q8N8W4 532 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 ATP6V0D2Q8N8Y2 350 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 LMO3Q8TAP4 145 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 CLEC4CQ8WTT0 213 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 ERCC4Q92889 916 aaPredicted RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 KAT5Q92993 513 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 BIRC7Q96CA5 298 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 SLC39A13Q96H72 371 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 FCRL2Q96LA5 508 aaPredicted RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 PPP1R9BQ96SB3 815 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 OMDQ99983 421 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 ACE2Q9BYF1 805 aaPredicted RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 PABPC3Q9H361 631 aaKnown RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 THAP9Q9H5L6 903 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 CCDC86Q9H6F5 360 aaKnown RBP7.42□□□□□ -1.22
USP46-208ENST00000512656 IL21RQ9HBE5 538 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 POPDC2Q9HBU9 364 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 FBXL12Q9NXK8 326 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 TJP2Q9UDY2 1190 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 MAN1B1Q9UKM7 699 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 CNTN6Q9UQ52 1028 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 SNX11Q9Y5W9 270 aa7.42□□□□□ -1.22
USP46-208ENST00000512656 FAM47DPA6NHR8 397 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 A6NHS1 94 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 F5H5T6 163 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 EREGO14944 169 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 YKT6O15498 198 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 THAP12O43422 761 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 TNFSF14O43557 240 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 FZD6O60353 706 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 RNASEH2AO75792 299 aaKnown RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 LETM1O95202 739 aaPredicted RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 MOCS2O96007 188 aaPredicted RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 GLI1P08151 1106 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 ABCB4P21439 1286 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 SSTR4P31391 388 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 SLC8A1P32418 973 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 CTSKP43235 329 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 CCR5P51681 352 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 RPS24P62847 133 aaKnown RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 YWHAZP63104 245 aaKnown RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 CDK17Q00537 523 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 SULT2A1Q06520 285 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 SCAPQ12770 1279 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 PAK1Q13153 545 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 MORC3Q14149 939 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 DCAF6Q58WW2 860 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 SLC45A4Q5BKX6 768 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 PITRM1Q5JRX3 1037 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 RABGAP1LQ5R372 815 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 NADSYN1Q6IA69 706 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 FDX2Q6P4F2 183 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 VN1R5Q7Z5H4 357 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 DSG4Q86SJ6 1040 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 TMEM110Q86TL2 294 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms