RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 TBL1YQ9BQ87 522 aa24.75■■□□□ 1.55
SPOCK3-221ENST00000512648 LMAN2LQ9H0V9 348 aa24.75■■□□□ 1.55
SPOCK3-221ENST00000512648 SSU72Q9NP77 194 aaKnown RBP24.75■■□□□ 1.55
SPOCK3-221ENST00000512648 FAM237BA0A1B0GVD1 139 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 GRXCR1A8MXD5 290 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 CKMP06732 381 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 RHOCP08134 193 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 MAGEA10P43363 369 aaPredicted RBP24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 SKIDA1Q1XH10 827 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 DENND5AQ6IQ26 1287 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 KDELC1Q6UW63 502 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 PRPF39Q86UA1 669 aaKnown RBP24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 BBS5Q8N3I7 341 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 DNAAF3Q8N9W5 541 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 SPATA22Q8NHS9 363 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 SHKBP1Q8TBC3 707 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 TASP1Q9H6P5 420 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 ATP13A1Q9HD20 1204 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 SYBUQ9NX95 663 aa24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 DNMT3BQ9UBC3 853 aaKnown RBP24.74■■□□□ 1.55
SPOCK3-221ENST00000512648 A0A0D9SEW6 157 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 E2F8A0AVK6 867 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 TYW5A2RUC4 315 aaKnown RBP24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 MOSPD3O75425 235 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 USP1O94782 785 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 TCF3P15923 654 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 SGSHP51688 502 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 ARHGAP15Q53QZ3 475 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 FAM109BQ6ICB4 259 aaPredicted RBP24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 CXorf57Q6NSI4 855 aaKnown RBP24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 SPRED2Q7Z698 418 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 ARRDC2Q8TBH0 407 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 PTCD2Q8WV60 388 aaKnown RBP24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 PABPC5Q96DU9 382 aaKnown RBP24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 NT5MQ9NPB1 228 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 SAMD15Q9P1V8 674 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 SH3BP1Q9Y3L3 701 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 FAM169AQ9Y6X4 670 aa24.73■■□□□ 1.55
SPOCK3-221ENST00000512648 NYNRINQ9P2P1 1898 aaKnown RBP24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 IQANK1A0A1B0GTG1 560 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 CES1P23141 567 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 CCR2P41597 374 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 TMED2Q15363 201 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 LGSNQ5TDP6 509 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 POTEHQ6S545 545 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 OR52K2Q8NGK3 314 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 MZB1Q8WU39 189 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 MRGPRX2Q96LB1 330 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 KIFC1Q9BW19 673 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 PRKD2Q9BZL6 878 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 TBK1Q9UHD2 729 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 SOX13Q9UN79 622 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 IKBKGQ9Y6K9 419 aa24.72■■□□□ 1.55
SPOCK3-221ENST00000512648 CXorf51AA0A1B0GTR3 108 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 LUC7L3O95232 432 aaKnown RBP24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 MT-CYBP00156 380 aaPredicted RBP24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 RHOP08100 348 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 EPCAMP16422 314 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 OXCT1P55809 520 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 NIPAL4Q0D2K0 466 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 CRYMQ14894 314 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 IL31Q6EBC2 164 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 CASC4Q6P4E1 433 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 ZNF354CQ86Y25 554 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 CMTM8Q8IZV2 173 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 OR7D4Q8NG98 312 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 PSKH2Q96QS6 385 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 POLR1EQ9GZS1 481 aaKnown RBP24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 MRM3Q9HC36 420 aaKnown RBP24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 UBP1Q9NZI7 540 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 CFAP97Q9P2B7 532 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 SEPT3Q9UH03 358 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 MTCL1Q9Y4B5 1905 aaKnown RBP24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 OBSL1O75147 1896 aa24.71■■□□□ 1.55
SPOCK3-221ENST00000512648 LEFTY2O00292 366 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 ZNF197O14709 1029 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 TSPAN3O60637 253 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 USP12O75317 370 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 RFPL2O75678 378 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 EPOP01588 193 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 MMP2P08253 660 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 INHBAP08476 426 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 BRAFP15056 766 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 SERPINB9P50453 376 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 WNT3AP56704 352 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 EFTUD2Q15029 972 aaKnown RBP eCLIP24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 MPPE1Q53F39 396 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 PCID2Q5JVF3 399 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 PRSS36Q5K4E3 855 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 GPR158Q5T848 1215 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 PGBD5Q8N414 524 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 KIAA1958Q8N8K9 716 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 CDKL2Q92772 493 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 MGME1Q9BQP7 344 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 HCFC1R1Q9NWW0 138 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 OR51B4Q9Y5P0 310 aa24.7■■□□□ 1.55
SPOCK3-221ENST00000512648 NRG2O14511 850 aaPredicted RBP24.7■■□□□ 1.54
SPOCK3-221ENST00000512648 PRPF4O43172 522 aaKnown RBP eCLIP24.7■■□□□ 1.54
SPOCK3-221ENST00000512648 TBL1XO60907 577 aa24.7■■□□□ 1.54
SPOCK3-221ENST00000512648 CNTFP26441 200 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms