RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 KMT5BQ4FZB7 885 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 FAM46CQ5VWP2 391 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 RNF219Q5W0B1 726 aaPredicted RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 RESP18Q5W5W9 173 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 NUGGCQ68CJ6 796 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 KYAT3Q6YP21 454 aaKnown RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 SV2BQ7L1I2 683 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 EPM2AIP1Q7L775 607 aaPredicted RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 XXYLT1Q8NBI6 393 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 LRRC61Q9BV99 259 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 NT5C1AQ9BXI3 368 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 CPEB1Q9BZB8 566 aaKnown RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 NUCKS1Q9H1E3 243 aaKnown RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 GOLPH3LQ9H4A5 285 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 APOBEC3GQ9HC16 384 aaKnown RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 OLA1Q9NTK5 396 aaKnown RBP9.37□□□□□ -0.91
NUP54-211ENST00000512151 TP53TG5Q9Y2B4 290 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 HS3ST3A1Q9Y663 406 aa9.37□□□□□ -0.91
NUP54-211ENST00000512151 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 A0A1B0GVL5 298 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 LMO7DNF2Z398 122 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 TMX2-CTNND1H3BSU7 103 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
NUP54-211ENST00000512151 YY2O15391 372 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 IRAK2O43187 625 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 LUC7L3O95232 432 aaKnown RBP9.36□□□□□ -0.91
NUP54-211ENST00000512151 ASS1P00966 412 aaKnown RBP9.36□□□□□ -0.91
NUP54-211ENST00000512151 CCL4P13236 92 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 CMA1P23946 247 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 DLG4P78352 724 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 CLDN10P78369 228 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 PDE1CQ14123 709 aaPredicted RBP9.36□□□□□ -0.91
NUP54-211ENST00000512151 DCAF6Q58WW2 860 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 PRRT3Q5FWE3 981 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 BSPRYQ5W0U4 402 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 NEK5Q6P3R8 708 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 Q6ZVU0 165 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 DCP2Q8IU60 420 aaKnown RBP9.36□□□□□ -0.91
NUP54-211ENST00000512151 GALNT11Q8NCW6 608 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 PARD3BQ8TEW8 1205 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 RNF139Q8WU17 664 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 TMEM74Q96NL1 305 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 PANK2Q9BZ23 570 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 IRX2Q9BZI1 471 aaPredicted RBP9.36□□□□□ -0.91
NUP54-211ENST00000512151 LRRN3Q9H3W5 708 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 CUEDC1Q9NWM3 386 aaPredicted RBP9.36□□□□□ -0.91
NUP54-211ENST00000512151 SIRPGQ9P1W8 387 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 GULP1Q9UBP9 304 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 XPO7Q9UIA9 1087 aaKnown RBP9.36□□□□□ -0.91
NUP54-211ENST00000512151 HPSEQ9Y251 543 aa9.36□□□□□ -0.91
NUP54-211ENST00000512151 NAV3Q8IVL0 2385 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 FAM237AA0A1B0GTK4 181 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 MCF2LO15068 1137 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 VPS4BO75351 444 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 PRKAR1AP10644 381 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 P4HA1P13674 534 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 PFKFB1P16118 471 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 PDGFRAP16234 1089 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 CD58P19256 250 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 ITGB7P26010 798 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 CD82P27701 267 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 OAS2P29728 719 aaKnown RBP9.35□□□□□ -0.91
NUP54-211ENST00000512151 NOS2P35228 1153 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 SLC11A2P49281 568 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 GSE1Q14687 1217 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 C16orf72Q14CZ0 275 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 SGSM1Q2NKQ1 1148 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 ZNF394Q53GI3 561 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 MS4A13Q5J8X5 152 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 RRAGBQ5VZM2 374 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 MSANTD2Q6P1R3 559 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 NELFCDQ8IXH7 590 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 ZNF557Q8N988 423 aaPredicted RBP9.35□□□□□ -0.91
NUP54-211ENST00000512151 Q8N9G6 341 aaPredicted RBP9.35□□□□□ -0.91
NUP54-211ENST00000512151 ZNF507Q8TCN5 953 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 GLMNQ92990 594 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 TCTN2Q96GX1 697 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 FCRL2Q96LA5 508 aaPredicted RBP9.35□□□□□ -0.91
NUP54-211ENST00000512151 GBP4Q96PP9 640 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 KLF6Q99612 283 aaPredicted RBP9.35□□□□□ -0.91
NUP54-211ENST00000512151 EPAS1Q99814 870 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 SPASTQ9UBP0 616 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 APOBEC3BQ9UH17 382 aaKnown RBP9.35□□□□□ -0.91
NUP54-211ENST00000512151 VPS4AQ9UN37 437 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 NAALADL1Q9UQQ1 740 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 FBN3Q75N90 2809 aa9.35□□□□□ -0.91
NUP54-211ENST00000512151 ADGRG4Q8IZF6 3080 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 APCP25054 2843 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 ZNF891A8MT65 544 aaPredicted RBP9.34□□□□□ -0.91
NUP54-211ENST00000512151 C1QTNF3-AMACRE9PGA6 284 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 STMND1H3BQB6 276 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 ATP9BO43861 1147 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 BNIP3LO60238 219 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 PCDH8O95206 1070 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 MOCS3O95396 460 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 PAK4O96013 591 aaPredicted RBP9.34□□□□□ -0.91
NUP54-211ENST00000512151 HLA-DRAP01903 254 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 ANXA6P08133 673 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 TSHRP16473 764 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms