RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-215ENST00000512098 RAB41Q5JT25 222 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 SEL1L3Q68CR1 1132 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 SCARA5Q6ZMJ2 495 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 CCDC117Q8IWD4 279 aaPredicted RBP13□□□□□ -0.33
SSBP2-215ENST00000512098 PHACTR4Q8IZ21 702 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 CARNMT1Q8N4J0 409 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 SCG3Q8WXD2 468 aaKnown RBP13□□□□□ -0.33
SSBP2-215ENST00000512098 SLC17A9Q9BYT1 436 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 SLC29A3Q9BZD2 475 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 UBXN6Q9BZV1 441 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 GPN2Q9H9Y4 310 aaPredicted RBP13□□□□□ -0.33
SSBP2-215ENST00000512098 TBC1D7Q9P0N9 293 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 GGT7Q9UJ14 662 aa13□□□□□ -0.33
SSBP2-215ENST00000512098 ARHGEF17Q96PE2 2063 aaPredicted RBP13□□□□□ -0.33
SSBP2-215ENST00000512098 GOLGA6L7A0A1B0GV03 622 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 SLC11A2P49281 568 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 COPB1P53618 953 aaKnown RBP12.99□□□□□ -0.33
SSBP2-215ENST00000512098 PFN3P60673 137 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 SULT2A1Q06520 285 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 APCDD1Q8J025 514 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 MMP21Q8N119 569 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 FSTL5Q8N475 847 aaPredicted RBP12.99□□□□□ -0.33
SSBP2-215ENST00000512098 PMEPA1Q969W9 287 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 KIAA1143Q96AT1 154 aaPredicted RBP12.99□□□□□ -0.33
SSBP2-215ENST00000512098 PRICKLE1Q96MT3 831 aaPredicted RBP12.99□□□□□ -0.33
SSBP2-215ENST00000512098 LENG8Q96PV6 779 aaPredicted RBP12.99□□□□□ -0.33
SSBP2-215ENST00000512098 DDA1Q9BW61 102 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 SLC13A1Q9BZW2 595 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 INTS2Q9H0H0 1204 aaKnown RBP12.99□□□□□ -0.33
SSBP2-215ENST00000512098 CYP4F12Q9HCS2 524 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 SFMBT1Q9UHJ3 866 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 CROCCQ5TZA2 2017 aa12.99□□□□□ -0.33
SSBP2-215ENST00000512098 RAD51BO15315 384 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 ATP9BO43861 1147 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 ACSL4O60488 711 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 PCDH8O95206 1070 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 LUC7L3O95232 432 aaKnown RBP12.98□□□□□ -0.33
SSBP2-215ENST00000512098 PAK4O96013 591 aaPredicted RBP12.98□□□□□ -0.33
SSBP2-215ENST00000512098 IGLV3-27P01718 113 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 FGF3P11487 239 aaPredicted RBP12.98□□□□□ -0.33
SSBP2-215ENST00000512098 P4HA1P13674 534 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 RPS24P62847 133 aaKnown RBP12.98□□□□□ -0.33
SSBP2-215ENST00000512098 RPS21P63220 83 aaKnown RBP12.98□□□□□ -0.33
SSBP2-215ENST00000512098 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 SLC12A1Q13621 1099 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 PTK2BQ14289 1009 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 PHF19Q5T6S3 580 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 KIAA1161Q6NSJ0 714 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 BHLHA9Q7RTU4 235 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 UNC45BQ8IWX7 931 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 STARD8Q92502 1023 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 CCDC127Q96BQ5 260 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 DNAJC19Q96DA6 116 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 LURAP1Q96LR2 239 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 KLF6Q99612 283 aaPredicted RBP12.98□□□□□ -0.33
SSBP2-215ENST00000512098 SEMA6CQ9H3T2 930 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 PILRAQ9UKJ1 303 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 PNMA8BQ9ULN7 279 aaPredicted RBP12.98□□□□□ -0.33
SSBP2-215ENST00000512098 B3GALT1Q9Y5Z6 326 aa12.98□□□□□ -0.33
SSBP2-215ENST00000512098 M0QYT0 321 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 FPGTO14772 594 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 PDGFAP04085 211 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 GLB1P16278 677 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 ZNF18P17022 549 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 TCN2P20062 427 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 VARSP26640 1264 aaKnown RBP12.97□□□□□ -0.33
SSBP2-215ENST00000512098 MAP4P27816 1152 aaKnown RBP12.97□□□□□ -0.33
SSBP2-215ENST00000512098 INCA1Q0VD86 236 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 ELOCQ15369 112 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 INPP5JQ15735 1006 aaPredicted RBP12.97□□□□□ -0.33
SSBP2-215ENST00000512098 SPRED1Q7Z699 444 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 ZSCAN30Q86W11 494 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 TP53INP2Q8IXH6 220 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 PCDH19Q8TAB3 1148 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 RNF139Q8WU17 664 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 ERCC4Q92889 916 aaPredicted RBP12.97□□□□□ -0.33
SSBP2-215ENST00000512098 MYEOVQ96EZ4 313 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 TWNKQ96RR1 684 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
SSBP2-215ENST00000512098 FGFBP2Q9BYJ0 223 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 ASPSCR1Q9BZE9 553 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 SPRY4Q9C004 299 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 SIRPGQ9P1W8 387 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 ITGB1BP2Q9UKP3 347 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 DOLKQ9UPQ8 538 aa12.97□□□□□ -0.33
SSBP2-215ENST00000512098 LOC101059948A0A1B0GTJ6 334 aa12.96□□□□□ -0.33
SSBP2-215ENST00000512098 MSI1O43347 362 aaKnown RBP12.96□□□□□ -0.33
SSBP2-215ENST00000512098 PHACTR2O75167 634 aa12.96□□□□□ -0.33
SSBP2-215ENST00000512098 RFPL1O75677 317 aa12.96□□□□□ -0.33
SSBP2-215ENST00000512098 KIF20AO95235 890 aa12.96□□□□□ -0.33
SSBP2-215ENST00000512098 ZBED1O96006 694 aa12.96□□□□□ -0.33
SSBP2-215ENST00000512098 ALPIP09923 528 aa12.96□□□□□ -0.33
SSBP2-215ENST00000512098 NCOA4Q13772 614 aa12.96□□□□□ -0.33
SSBP2-215ENST00000512098 ARHGAP44Q17R89 818 aa12.96□□□□□ -0.33
SSBP2-215ENST00000512098 PPP1R26Q5T8A7 1209 aaPredicted RBP12.96□□□□□ -0.33
SSBP2-215ENST00000512098 DIEXFQ68CQ4 756 aaKnown RBP12.96□□□□□ -0.33
SSBP2-215ENST00000512098 SP5Q6BEB4 398 aaPredicted RBP12.96□□□□□ -0.33
SSBP2-215ENST00000512098 NADSYN1Q6IA69 706 aa12.96□□□□□ -0.33
SSBP2-215ENST00000512098 NLGN4XQ8N0W4 816 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms