RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 KCNT1Q5JUK3 1230 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 N4BP2L1Q5TBK1 243 aaPredicted RBP16.83■□□□□ 0.28
DDX41-213ENST00000512027 AGBL4Q5VU57 503 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 RETSATQ6NUM9 610 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 ZNF354CQ86Y25 554 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 OR6K2Q8NGY2 324 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 SYN2Q92777 582 aaPredicted RBP16.83■□□□□ 0.28
DDX41-213ENST00000512027 ARHGEF26Q96DR7 871 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 SLC6A18Q96N87 628 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 KCTD15Q96SI1 283 aaPredicted RBP16.83■□□□□ 0.28
DDX41-213ENST00000512027 EPAS1Q99814 870 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 THAP2Q9H0W7 228 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 DHX35Q9H5Z1 703 aaKnown RBP16.83■□□□□ 0.28
DDX41-213ENST00000512027 SCINQ9Y6U3 715 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3DA0A087WVF3 549 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3IA0A087WXS9 549 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3EA0A087X179 549 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3KA0A087X1G2 549 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3FA6NER0 549 aaPredicted RBP16.82■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3LB9A6J9 549 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 OPHN1O60890 802 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 LRCH4O75427 683 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 GJB3O75712 270 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3HP0C7X1 549 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 MIPP30301 263 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 MAT2AP31153 395 aaKnown RBP16.82■□□□□ 0.28
DDX41-213ENST00000512027 GKP32189 559 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 CLCN6P51797 869 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 TPI1P60174 286 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 SFSWAPQ12872 951 aaKnown RBP16.82■□□□□ 0.28
DDX41-213ENST00000512027 POLD3Q15054 466 aaPredicted RBP16.82■□□□□ 0.28
DDX41-213ENST00000512027 ARSIQ5FYB1 569 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 FAM46CQ5VWP2 391 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3GQ6DHY5 549 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3CQ6IPX1 549 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 TBC1D3Q8IZP1 549 aaPredicted RBP16.82■□□□□ 0.28
DDX41-213ENST00000512027 FAM131CQ96AQ9 280 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 HMCESQ96FZ2 354 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 BTBD6Q96KE9 485 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 MAGEH1Q9H213 219 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 WASF2Q9Y6W5 498 aa16.82■□□□□ 0.28
DDX41-213ENST00000512027 A0A1W2PPC4 97 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 C10orf142B7Z368 130 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 RASA4BC9J798 803 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 KCNK3O14649 394 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 RASA4O43374 803 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 PLRG1O43660 514 aaKnown RBP16.81■□□□□ 0.28
DDX41-213ENST00000512027 LEFTY1O75610 366 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 ADRB1P08588 477 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 CD59P13987 128 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 DESP17661 470 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 AFF3P51826 1226 aaKnown RBP16.81■□□□□ 0.28
DDX41-213ENST00000512027 CCNHP51946 323 aaPredicted RBP16.81■□□□□ 0.28
DDX41-213ENST00000512027 AIF1P55008 147 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 TAS2R38P59533 333 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 KIF19Q2TAC6 998 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 PIP5KL1Q5T9C9 394 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 TRIM11Q96F44 468 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 CELF6Q96J87 481 aaKnown RBP16.81■□□□□ 0.28
DDX41-213ENST00000512027 CCDC114Q96M63 670 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 CAMK1GQ96NX5 476 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 ZDHHC6Q9H6R6 413 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 GAREM1Q9H706 876 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 DNAAF2Q9NVR5 837 aaKnown RBP16.81■□□□□ 0.28
DDX41-213ENST00000512027 IL36AQ9UHA7 158 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 FNDC3AQ9Y2H6 1198 aaKnown RBP16.81■□□□□ 0.28
DDX41-213ENST00000512027 FARP1Q9Y4F1 1045 aaPredicted RBP16.81■□□□□ 0.28
DDX41-213ENST00000512027 SNX11Q9Y5W9 270 aa16.81■□□□□ 0.28
DDX41-213ENST00000512027 BZW2Q9Y6E2 419 aaKnown RBP16.81■□□□□ 0.28
DDX41-213ENST00000512027 CEP295Q9C0D2 2601 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 EEF2KO00418 725 aaKnown RBP16.8■□□□□ 0.28
DDX41-213ENST00000512027 CBFA2T2O43439 604 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 PRPSAP2O60256 369 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 RNF8O76064 485 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 WNT1P04628 370 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 TPM3P06753 285 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 MYBL1P10243 752 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 IL1R2P27930 398 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 ETFBP38117 255 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 EIF4A3P38919 411 aaKnown RBP16.8■□□□□ 0.28
DDX41-213ENST00000512027 RECQLP46063 649 aaPredicted RBP16.8■□□□□ 0.28
DDX41-213ENST00000512027 SMTNL2Q2TAL5 461 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 HLA-BQ31612 363 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 CARD16Q5EG05 197 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 PPP6R3Q5H9R7 873 aaPredicted RBP16.8■□□□□ 0.28
DDX41-213ENST00000512027 CCDC122Q5T0U0 273 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 ATXN7L2Q5T6C5 722 aaPredicted RBP16.8■□□□□ 0.28
DDX41-213ENST00000512027 ERMARDQ5T6L9 678 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 VPS36Q86VN1 386 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 RYBPQ8N488 228 aaPredicted RBP16.8■□□□□ 0.28
DDX41-213ENST00000512027 PCDH20Q8N6Y1 951 aaKnown RBP16.8■□□□□ 0.28
DDX41-213ENST00000512027 FNIP1Q8TF40 1166 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 IQCDQ96DY2 449 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 NUP85Q9BW27 656 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 CEP44Q9C0F1 390 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 ANKRD6Q9Y2G4 727 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.8■□□□□ 0.281e-13■■■□□ 18.9
DDX41-213ENST00000512027 CHD8Q9HCK8 2581 aa16.8■□□□□ 0.28
DDX41-213ENST00000512027 WASH4PA8MWX3 477 aa16.79■□□□□ 0.28
DDX41-213ENST00000512027 BUB1O43683 1085 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms